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BMC Bioinformatics|October 26, 2006
CGAT: a comparative genome analysis tool for visualizing alignments in the analysis of complex evolutionary changes between closely related genomesIkuo Uchiyama, Toshio Higuchi, Ichizo Kobayashi
Plos One|April 16, 2015
Construction of an ortholog database using the semantic web technology for integrative analysis of genomic dataHirokazu Chiba, Hiroyo Nishide, Ikuo Uchiyama
Gene|September 5, 2006
How genomes rearrange: genome comparison within bacteria Neisseria suggests roles for mobile elements in formation of complex genome polymorphismsMikihiko Kawai, Keiichiro Nakao, Ikuo Uchiyama, et al.
Nucleic Acids Research|November 3, 2012
MBGD update 2013: the microbial genome database for exploring the diversity of microbial worldIkuo Uchiyama, Motohiro Mihara, Hiroyo Nishide, et al.
Nucleic Acids Research|November 16, 2014
MBGD update 2015: microbial genome database for flexible ortholog analysis utilizing a diverse set of genomic dataIkuo Uchiyama, Motohiro Mihara, Hiroyo Nishide, et al.
Environmental Microbiology Reports|December 5, 2014
Low frequency of endospore-specific genes in subseafloor sedimentary metagenomesMikihiko Kawai, Ikuo Uchiyama, Hideto Takami, et al.
Plos One|May 3, 2011
Domain movement within a gene: a novel evolutionary mechanism for protein diversificationYoshikazu Furuta, Mikihiko Kawai, Ikuo Uchiyama, et al.
Nucleic Acids Research|November 22, 2018
MBGD update 2018: microbial genome database based on hierarchical orthology relations covering closely related and distantly related comparisonsIkuo Uchiyama, Motohiro Mihara, Hiroyo Nishide, et al.
Plos One|July 22, 2015
Functional Classification of Uncultured "Candidatus Caldiarchaeum subterraneum" Using the Maple SystemHideto Takami, Wataru Arai, Kazuhiro Takemoto, et al.
Molecular Biology and Evolution|April 8, 2006
Evolution of paralogous genes: Reconstruction of genome rearrangements through comparison of multiple genomes within Staphylococcus aureusTakeshi Tsuru, Mikihiko Kawai, Yoko Mizutani-Ui, et al.
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