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Nature Protocols|January 9, 2010
A protocol for generating a high-quality genome-scale metabolic reconstructionInes Thiele, Bernhard Ø PalssonBMC Systems Biology|October 4, 2011
The human metabolic reconstruction Recon 1 directs hypotheses of novel human metabolic functionsOttar Rolfsson, Bernhard Ø Palsson, Ines ThieleBMC Systems Biology|September 17, 2008
A genome-scale metabolic reconstruction of Pseudomonas putida KT2440: iJN746 as a cell factoryJuan Nogales, Bernhard Ø Palsson, Ines ThieleBiophysical Journal|March 15, 2006
Candidate states of Helicobacter pylori's genome-scale metabolic network upon application of "loop law" thermodynamic constraintsNathan D Price, Ines Thiele, Bernhard Ø PalssonPlos Computational Biology|February 21, 2009
Identification of potential pathway mediation targets in Toll-like receptor signalingFan Li, Ines Thiele, Neema Jamshidi, et al.The Journal of Biological Chemistry|December 2, 2004
Candidate metabolic network states in human mitochondria. Impact of diabetes, ischemia, and dietInes Thiele, Nathan D Price, Thuy D Vo, et al.Plos Computational Biology|March 14, 2009
Genome-scale reconstruction of Escherichia coli's transcriptional and translational machinery: a knowledge base, its mathematical formulation, and its functional characterizationInes Thiele, Neema Jamshidi, Ronan M T Fleming, et al.The Biochemical Journal|October 17, 2012
Inferring the metabolism of human orphan metabolites from their metabolic network context affirms human gluconokinase activityÓttar Rolfsson, Giuseppe Paglia, Manuela Magnusdóttir, et al.Journal of Bacteriology|August 4, 2005
Expanded metabolic reconstruction of Helicobacter pylori (iIT341 GSM/GPR): an in silico genome-scale characterization of single- and double-deletion mutantsInes Thiele, Thuy D Vo, Nathan D Price, et al.BMC Systems Biology|October 21, 2010
A detailed genome-wide reconstruction of mouse metabolism based on human Recon 1Martin I Sigurdsson, Neema Jamshidi, Eirikur Steingrimsson, et al.Pageof 26