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Biorxiv : the Preprint Server for Biology|October 9, 2023
Leveraging GPT-4 for Identifying Cancer Phenotypes in Electronic Health Records: A Performance Comparison between GPT-4, GPT-3.5-turbo, Flan-T5 and spaCy's Rule-based & Machine Learning-based methodsKriti Bhattarai, Inez Y Oh, Jonathan Moran Sierra, et al.Journal of Biomedical Informatics|August 25, 2025
CeRTS: certainty retrieval token search in large language model clinical information extractionLars E Schimmelpfennig, Kriti Bhattarai, Inez Y Oh, et al.JAMIA Open|January 23, 2025
Evaluating dimensionality reduction of comorbidities for predictive modeling in individuals with neurofibromatosis type 1Aditi Gupta, Ethan Hillis, Inez Y Oh, et al.Genome Research|February 14, 2024
Pathogenic variants in <i>CRX</i> have distinct <i>cis</i>-regulatory effects on enhancers and silencers in photoreceptorsJames L Shepherdson, Ryan Z Friedman, Yiqiao Zheng, et al.Biorxiv : the Preprint Server for Biology|June 9, 2023
Pathogenic variants in Crx have distinct cis-regulatory effects on enhancers and silencers in photoreceptorsJames L Shepherdson, Ryan Z Friedman, Yiqiao Zheng, et al.Journal of Neurodevelopmental Disorders|April 30, 2025
Automated extraction of functional biomarkers of verbal and ambulatory ability from multi-institutional clinical notes using large language modelsLevi Kaster, Ethan Hillis, Inez Y Oh, et al.The Journal of Investigative Dermatology|January 29, 2014
Regulation of the dynamic chromatin architecture of the epidermal differentiation complex is mediated by a c-Jun/AP-1-modulated enhancerInez Y Oh, Danielle M Albea, Zane A Goodwin, et al.Journal of the American Medical Informatics Association : JAMIA|September 18, 2025
Comparison of rule- and large language model-based phenotype extraction from clinical notes for neurofibromatosis type 1Levi Kaster, Ethan Hillis, Inez Y Oh, et al.Spine|May 30, 2023
Machine Learning for Benchmarking Adolescent Idiopathic Scoliosis Surgery OutcomesAditi Gupta, Inez Y Oh, Seunghwan Kim, et al.Nature Communications|May 8, 2021
Selective sweep for an enhancer involucrin allele identifies skin barrier adaptation out of AfricaMary Elizabeth Mathyer, Erin A Brettmann, Alina D Schmidt, et al.Pageof 3