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Journal of Molecular Evolution|November 6, 2015
The Code of Silence: Widespread Associations Between Synonymous Codon Biases and Gene FunctionFran SupekMolecular Systems Biology|January 19, 2026
The DNA dialect: a comprehensive guide to pretrained genomic language modelsMarcell Veiner, Fran SupekMethods in Molecular Biology (Clifton, N.J.)|November 5, 2016
Visualizing GO AnnotationsFran Supek, Nives ŠkuncaNature|February 25, 2015
Differential DNA mismatch repair underlies mutation rate variation across the human genomeFran Supek, Ben LehnerDNA Repair|July 17, 2019
Scales and mechanisms of somatic mutation rate variation across the human genomeFran Supek, Ben LehnerBioinformatics (Oxford, England)|April 3, 2004
INCA: synonymous codon usage analysis and clustering by means of self-organizing mapFran Supek, Kristian VlahovicekGenetics|April 28, 2010
On relevance of codon usage to expression of synthetic and natural genes in Escherichia coliFran Supek, Tomislav ŠmucBMC Bioinformatics|July 21, 2005
Comparison of codon usage measures and their applicability in prediction of microbial gene expressivityFran Supek, Kristian VlahovicekNature Cancer|January 10, 2024
Cell cycle gene alterations associate with a redistribution of mutation risk across chromosomal domains in human cancersMarina Salvadores, Fran SupekNature Communications|July 20, 2024
Copy number losses of oncogenes and gains of tumor suppressor genes generate common driver mutationsElizaveta Besedina, Fran SupekPageof 10