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BMC Genomics|December 5, 2009
The oligonucleotide frequency derived error gradient and its application to the binning of metagenome fragmentsIsaam Saeed, Saman K Halgamuge
Nucleic Acids Research|December 20, 2011
Unsupervised discovery of microbial population structure within metagenomes using nucleotide base compositionIsaam Saeed, Sen-Lin Tang, Saman K Halgamuge
BMC Genomics|December 19, 2015
A new peak detection algorithm for MALDI mass spectrometry data based on a modified Asymmetric Pseudo-Voigt modelChalini D Wijetunge, Isaam Saeed, Berin A Boughton, et al.
Computational and Structural Biotechnology Journal|November 1, 2017
Assessing Species Diversity Using Metavirome Data: Methods and ChallengesDamayanthi Herath, Duleepa Jayasundara, David Ackland, et al.
Bioinformatics (Oxford, England)|June 12, 2015
EXIMS: an improved data analysis pipeline based on a new peak picking method for EXploring Imaging Mass Spectrometry dataChalini D Wijetunge, Isaam Saeed, Berin A Boughton, et al.
BMC Bioinformatics|February 6, 2019
ENVirT: inference of ecological characteristics of viruses from metagenomic dataDuleepa Jayasundara, Damayanthi Herath, Damith Senanayake, et al.
The ISME Journal|July 12, 2013
Microbial and viral metagenomes of a subtropical freshwater reservoir subject to climatic disturbancesChing-Hung Tseng, Pei-Wen Chiang, Fuh-Kwo Shiah, et al.
Frontiers in Microbiology|September 5, 2018
Comprehensive Insights Into Composition, Metabolic Potentials, and Interactions Among Archaeal, Bacterial, and Viral Assemblages in Meromictic Lake Shunet in SiberiaYu-Ting Wu, Cheng-Yu Yang, Pei-Wen Chiang, et al.
BMC Genomics|April 17, 2015
Prokaryotic assemblages and metagenomes in pelagic zones of the South China SeaChing-Hung Tseng, Pei-Wen Chiang, Hung-Chun Lai, et al.
Plos One|April 23, 2014
Bioinformatics pipelines for targeted resequencing and whole-exome sequencing of human and mouse genomes: a virtual appliance approach for instant deploymentJason Li, Maria A Doyle, Isaam Saeed, et al.
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