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Letters in Applied Microbiology|January 6, 2011
FISH analysis of Lactobacillus biofilms in the gastrointestinal tract of different hostsS Lebeer, T L A Verhoeven, I J J Claes, et al.International Journal of Food Microbiology|May 16, 2025
Whole-genome sequencing of soil- and foodborne Bacillus cereus sensu lato indicates no clear association between their virulence repertoire, genomic diversity and food matrixBram Jacobs, Bert Bogaerts, Marie Verhaegen, et al.Frontiers in Microbiology|March 22, 2019
Validation of a Bioinformatics Workflow for Routine Analysis of Whole-Genome Sequencing Data and Related Challenges for Pathogen Typing in a European National Reference Center: Neisseria meningitidis as a Proof-of-ConceptBert Bogaerts, Raf Winand, Qiang Fu, et al.Foods (Basel, Switzerland)|February 11, 2023
Targeted High-Throughput Sequencing Enables the Detection of Single Nucleotide Variations in CRISPR/Cas9 Gene-Edited OrganismsMarie-Alice Fraiture, Jolien D'aes, Emmanuel Guiderdoni, et al.Environmental Research|April 3, 2025
Recent and chronic ambient air pollution exposure in association with telomere length and mitochondrial DNA content in the general populationPauline Hautekiet, Tim S Nawrot, Dries S Martens, et al.Food Chemistry. Molecular Sciences|April 13, 2022
A shotgun metagenomics approach to detect and characterize unauthorized genetically modified microorganisms in microbial fermentation productsFlorence E Buytaers, Marie-Alice Fraiture, Bas Berbers, et al.NPJ Science of Food|May 11, 2026
Enhancing low-level genome-edited crop detection and identification in food mixtures using nanopore adaptive sampling: Rice-Soybean mixture as proof-of-conceptArno Stuyts, Amin Zolfaghari, Jolien D'aes, et al.Microorganisms|August 26, 2023
Whole-Genome Sequencing-Based Screening of MRSA in Patients and Healthcare Workers in Public Hospitals in BeninCarine Laurence Yehouenou, Bert Bogaerts, Kevin Vanneste, et al.Journal of Clinical Microbiology|August 22, 2025
Oxford Nanopore Technologies R10 sequencing enables accurate cgMLST-based bacterial outbreak investigation of Neisseria meningitidis and Salmonella enterica when accounting for methylation-related errorsBert Bogaerts, Margo Maex, Florian Commans, et al.BMC Genomics|August 7, 2025
Investigating fungal diversity through metabarcoding for environmental samples: assessment of ITS1 and ITS2 Illumina sequencing using multiple defined mock communities with different classification methods and reference databasesRaf Winand, Elizabet D'hooge, Alexander Van Uffelen, et al.Pageof 17