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Journal of Biomolecular Structure & Dynamics|May 22, 2012
Aromatic Base Stacking in DNA: From ab initio Calculations to Molecular Dynamics SimulationsJ Sponer, I Berger, N Spačková, et al.Journal of Biomolecular Structure & Dynamics|April 1, 1997
Hydrogen-bonded trimers of DNA bases and their interaction with metal cations: ab initio quantum-chemical and empirical potential studyJ Sponer, J V Burda, P Mejzlík, et al.Journal of Biological Inorganic Chemistry : JBIC : a Publication of the Society of Biological Inorganic Chemistry|November 7, 1999
Metal ions in non-complementary DNA base pairs: an ab initio study of Cu(I), Ag(I), and Au(I) complexes with the cytosine-adenine base pairJ Sponer, M Sabat, J V Burda, et al.Journal of Biomolecular Structure & Dynamics|June 1, 1985
Perturbation of hydrogen bonds in the adenine ... thymine base pair by Na+, Mg2+, Ca2+ and NH4+ cationsP Hobza, C SandorfyBiophysical Chemistry|May 1, 1984
A quantum chemical study of the effect of Na+ on the hydrogen bonds in the adenine-thymine base-pairP Hobza, C SandorfyProceedings of the National Academy of Sciences of the United States of America|May 1, 1983
Perturbation of hydrogen bonds in the adenine . thymine base pair by Na+: A quantum chemical studyP Hobza, C SandorfyChemistry (Weinheim an Der Bergstrasse, Germany)|June 20, 2001
At nonzero temperatures, stacked structures of methylated nucleic acid base pairs and microhydrated nonmethylated nucleic acid base pairs are favored over planar hydrogen-bonded structures: a molecular dynamics simulations studyM Kabelác, P HobzaGeneral Physiology and Biophysics|June 1, 1989
Characterization of the base stacking interactions in DNA by means of Lennard-Jones empirical potentialsJ Sponer, J KyprInternational Journal of Biological Macromolecules|February 1, 1994
Close mutual contacts of the amino groups in DNAJ Sponer, J KyprJournal of Biomolecular Structure & Dynamics|October 1, 1993
Theoretical analysis of the base stacking in DNA: choice of the force field and a comparison with the oligonucleotide crystal structuresJ Sponer, J KyprPageof 5