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Genome Biology|August 26, 2025
DelSIEVE: cell phylogeny modeling of single nucleotide variants and deletions from single-cell DNA sequencing dataSenbai Kang, Nico Borgsmüller, Monica Valecha, et al.
BMC Bioinformatics|January 5, 2017
Detailed simulation of cancer exome sequencing data reveals differences and common limitations of variant callersAriane L Hofmann, Jonas Behr, Jochen Singer, et al.
Psychological Medicine|August 5, 2021
Longitudinal symptomatic interactions in long-standing schizophrenia: a novel five-point analysis based on directed acyclic graphsGiusi Moffa, Jack Kuipers, Giuseppe Carrà, et al.
Bioinformatics (Oxford, England)|September 3, 2016
Large-scale inference of conjunctive Bayesian networksHesam Montazeri, Jack Kuipers, Roger Kouyos, et al.
Schizophrenia Bulletin|May 19, 2017
Using Directed Acyclic Graphs in Epidemiological Research in Psychosis: An Analysis of the Role of Bullying in PsychosisGiusi Moffa, Gennaro Catone, Jack Kuipers, et al.
Cancers|May 5, 2021
Spatial Distribution of Private Gene Mutations in Clear Cell Renal Cell CarcinomaAriane L Moore, Aashil A Batavia, Jack Kuipers, et al.
Plos Computational Biology|September 7, 2021
Comparing mutational pathways to lopinavir resistance in HIV-1 subtypes B versus CSusana Posada-Céspedes, Gert Van Zyl, Hesam Montazeri, et al.
Plos Computational Biology|September 6, 2022
Multi-omics subtyping of hepatocellular carcinoma patients using a Bayesian network mixture modelPolina Suter, Eva Dazert, Jack Kuipers, et al.
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