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ACS Synthetic Biology|June 29, 2022
pySBOL3: SBOL3 for Python ProgrammersTom Mitchell, Jacob Beal, Bryan BartleyPlos One|August 19, 2011
Automatic compilation from high-level biologically-oriented programming language to genetic regulatory networksJacob Beal, Ting Lu, Ron WeissBio Systems|September 8, 2015
Managing bioengineering complexity with AI techniquesJacob Beal, Aaron Adler, Fusun YamanFrontiers in Bioengineering and Biotechnology|July 28, 2026
The limits of sequence-based biosecurity screening tools in the age of AI-assisted protein designBruce J Wittmann, Nicole E Wheeler, Steven T Murphy, et al.DNA Repair|July 24, 2009
Cellular pathways for DNA repair and damage tolerance of formaldehyde-induced DNA-protein crosslinksBendert de Graaf, Adam Clore, Amanda K McCulloughPlos One|April 20, 2017
Reducing DNA context dependence in bacterial promotersSwati B Carr, Jacob Beal, Douglas M DensmoreACS Synthetic Biology|April 12, 2022
Simulation-Based Engineering of Time-Delayed Safety Switches for Safer Gene TherapiesHelen Scott, Dashan Sun, Jacob Beal, et al.Methods in Molecular Biology (Clifton, N.J.)|December 19, 2020
TASBE Image Analytics: A Processing Pipeline for Quantifying Cell Organization from Fluorescent MicroscopyNicholas Walczak, Jacob Beal, Jesse Tordoff, et al.Trends in Biotechnology|June 9, 2018
Time to Get Serious about Measurement in Synthetic BiologyJacob Beal, Traci Haddock-Angelli, Natalie Farny, et al.ACS Synthetic Biology|November 10, 2021
Synthetic Biology Curation Tools (SYNBICT)Nicholas Roehner, Jeanet Mante, Chris J Myers, et al.Pageof 9