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Nucleic Acids Research|April 8, 2024
Frustraevo: a web server to localize and quantify the conservation of local energetic frustration in protein familiesR Gonzalo Parra, Maria I Freiberger, Miriam Poley-Gil, et al.
The Journal of Biological Chemistry|August 7, 2022
An intrinsically disordered transcription activation domain increases the DNA binding affinity and reduces the specificity of NFκB p50/RelAHannah E R Baughman, Dominic Narang, Wei Chen, et al.
Plos Computational Biology|February 12, 2021
OpenAWSEM with Open3SPN2: A fast, flexible, and accessible framework for large-scale coarse-grained biomolecular simulationsWei Lu, Carlos Bueno, Nicholas P Schafer, et al.
Nucleic Acids Research|October 6, 2020
The Nucleome Data Bank: web-based resources to simulate and analyze the three-dimensional genomeVinícius G Contessoto, Ryan R Cheng, Arya Hajitaheri, et al.
Nucleic Acids Research|May 9, 2020
AWSEM-Suite: a protein structure prediction server based on template-guided, coevolutionary-enhanced optimized folding landscapesShikai Jin, Vinicius G Contessoto, Mingchen Chen, et al.
Nature Communications|December 16, 2023
Local energetic frustration conservation in protein families and superfamiliesMaria I Freiberger, Victoria Ruiz-Serra, Camila Pontes, et al.
Journal of the American Chemical Society|May 5, 2023
Mass Spectrometry of RNA-Binding Proteins during Liquid-Liquid Phase Separation Reveals Distinct Assembly Mechanisms and Droplet ArchitecturesCagla Sahin, Aikaterini Motso, Xinyu Gu, et al.
Biomolecules|March 1, 2019
Structural and Dynamical Order of a Disordered Protein: Molecular Insights into Conformational Switching of PAGE4 at the Systems LevelXingcheng Lin, Prakash Kulkarni, Federico Bocci, et al.
Cell|July 12, 2024
Three-dimensional genome architecture persists in a 52,000-year-old woolly mammoth skin sampleMarcela Sandoval-Velasco, Olga Dudchenko, Juan Antonio Rodríguez, et al.
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