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Microbiology Spectrum|December 8, 2022
Host Genetics and Environment Shape the Composition of the Gastrointestinal Microbiome in Nonhuman PrimatesJacob K Flynn, Alexandra M Ortiz, Richard Herbert, et al.Microbiology Spectrum|November 10, 2021
The Vaginal Microbiome of Nonhuman Primates Can Be Only Transiently Altered to Become Lactobacillus Dominant without Reducing InflammationCharlotte A Langner, Alexandra M Ortiz, Jacob K Flynn, et al.Nature Communications|July 10, 2026
Hematological consequences of environmental change during dewilding of rhesus macaquesAnnabelle Smith, Kasalina Kiwanuka, Gabriela Pessenda, et al.Journal of Virology|July 5, 2019
Antiretroviral Therapy Administration in Healthy Rhesus Macaques Is Associated with Transient Shifts in Intestinal Bacterial Diversity and Modest Immunological PerturbationsAlexandra M Ortiz, Jacob K Flynn, Sarah R DiNapoli, et al.Journal of Virology|February 22, 2019
Simian Immunodeficiency Virus Infects Functionally Polarized Memory CD4 T Cells Equivalently In VivoStephen H Lai, Carly E Starke, Jacob K Flynn, et al.Pathogens & Immunity|May 20, 2020
Biomarkers of Cellular Stress Do Not Associate with sCD14 in Progressive HIV and SIV Infections in VivoCarol L Vinton, Carly E Starke, Alexandra M Ortiz, et al.Scientific Reports|May 6, 2022
Butyrate administration is not sufficient to improve immune reconstitution in antiretroviral-treated SIV-infected macaquesAlexandra M Ortiz, Jennifer Simpson, Charlotte A Langner, et al.JCI Insight|August 26, 2020
Epigenetic silencing of CD4 expression in nonpathogenic SIV infection in African green monkeysJoseph C Mudd, Stephen Lai, Sanjana Shah, et al.Cell Reports|February 27, 2023
Experimental bacterial dysbiosis with consequent immune alterations increase intrarectal SIV acquisition susceptibilityAlexandra M Ortiz, Phillip J Baker, Charlotte A Langner, et al.Mucosal Immunology|June 9, 2025
Repeated enema administration in rhesus macaques is not sufficient to promote bacterial dysbiosis or gastrointestinal dysfunctionAlexandra M Ortiz, Fabiola Castello Casta, Elizabeth G Bodykevich, et al.Pageof 2