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Methods in Molecular Biology (Clifton, N.J.)|December 7, 2011
Bacterial molecular networks: bridging the gap between functional genomics and dynamical modellingJacques van Helden, Ariane Toussaint, Denis ThieffryBioinformatics (Oxford, England)|September 25, 2009
In response to 'Can sugars be produced from fatty acids? A test case for pathway analysis tools'Karoline Faust, Didier Croes, Jacques van HeldenJournal of Molecular Biology|March 14, 2009
Metabolic pathfinding using RPAIR annotationKaroline Faust, Didier Croes, Jacques van HeldenBMC Bioinformatics|February 17, 2007
In silico identification of NF-kappaB-regulated genes in pancreatic beta-cellsNajib Naamane, Jacques van Helden, Decio L EizirikMethods (San Diego, Calif.)|May 20, 2009
Investigating transcriptional regulation: from analysis of complex networks to discovery of cis-regulatory elementsRekin's Janky, Jacques van Helden, M Madan BabuBioinformatics (Oxford, England)|September 2, 2009
Retrieve-ensembl-seq: user-friendly and large-scale retrieval of single or multi-genome sequences from EnsemblOlivier Sand, Morgane Thomas-Chollier, Jacques van HeldenBioinformatics (Oxford, England)|March 16, 2010
Pathway discovery in metabolic networks by subgraph extractionKaroline Faust, Pierre Dupont, Jérôme Callut, et al.Nature Protocols|September 20, 2008
Using RSAT oligo-analysis and dyad-analysis tools to discover regulatory signals in nucleic sequencesMatthieu Defrance, Rekin's Janky, Olivier Sand, et al.Bioinformatics (Oxford, England)|July 7, 2005
Discrimination of yeast genes involved in methionine and phosphate metabolism on the basis of upstream motifsDidier Gonze, Sylvie Pinloche, Olivier Gascuel, et al.Nucleic Acids Research|June 28, 2005
Metabolic PathFinding: inferring relevant pathways in biochemical networksDidier Croes, Fabian Couche, Shoshana J Wodak, et al.Pageof 8