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Methods in Molecular Biology (Clifton, N.J.)|December 7, 2011
Bacterial molecular networks: bridging the gap between functional genomics and dynamical modellingJacques van Helden, Ariane Toussaint, Denis ThieffryMolecular Biology and Evolution|February 1, 2008
Reticulate representation of evolutionary and functional relationships between phage genomesGipsi Lima-Mendez, Jacques Van Helden, Ariane Toussaint, et al.Bioinformatics (Oxford, England)|February 2, 2008
Prophinder: a computational tool for prophage prediction in prokaryotic genomesGipsi Lima-Mendez, Jacques Van Helden, Ariane Toussaint, et al.BMC Genomics|April 9, 2013
Transcriptional and epigenetic signatures of zygotic genome activation during early Drosophila embryogenesisElodie Darbo, Carl Herrmann, Thomas Lecuit, et al.Nucleic Acids Research|December 14, 2011
RSAT peak-motifs: motif analysis in full-size ChIP-seq datasetsMorgane Thomas-Chollier, Carl Herrmann, Matthieu Defrance, et al.Nature Protocols|July 28, 2012
A complete workflow for the analysis of full-size ChIP-seq (and similar) data sets using peak-motifsMorgane Thomas-Chollier, Elodie Darbo, Carl Herrmann, et al.Nucleic Acids Research|June 8, 2017
RSAT matrix-clustering: dynamic exploration and redundancy reduction of transcription factor binding motif collectionsJaime Abraham Castro-Mondragon, Sébastien Jaeger, Denis Thieffry, et al.Nucleic Acids Research|July 1, 2011
RSAT 2011: regulatory sequence analysis toolsMorgane Thomas-Chollier, Matthieu Defrance, Alejandra Medina-Rivera, et al.Bioinformatics (Oxford, England)|February 7, 2004
Metrics for comparing regulatory sequences on the basis of pattern countsJacques van HeldenPageof 18