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Iscience|April 25, 2022
Thermodynamics-based modeling reveals regulatory effects of indirect transcription factor-DNA bindingShounak Bhogale, Saurabh SinhaPlos Computational Biology|November 14, 2007
MORPH: probabilistic alignment combined with hidden Markov models of cis-regulatory modulesSaurabh Sinha, Xin HeBiorxiv : the Preprint Server for Biology|November 28, 2023
SPREd: A simulation-supervised neural network tool for gene regulatory network reconstructionZijun Wu, Saurabh SinhaCell Systems|September 2, 2020
SERGIO: A Single-Cell Expression Simulator Guided by Gene Regulatory NetworksPayam Dibaeinia, Saurabh SinhaBioinformatics (Oxford, England)|September 10, 2016
A novel method for predicting activity of cis-regulatory modules, based on a diverse training setWei Yang, Saurabh SinhaBioinformatics Advances|March 6, 2024
SPREd: a simulation-supervised neural network tool for gene regulatory network reconstructionZijun Wu, Saurabh SinhaBioinformatics (Oxford, England)|May 7, 2016
Characterizing gene sets using discriminative random walks with restart on heterogeneous biological networksCharles Blatti, Saurabh SinhaSensors (Basel, Switzerland)|June 1, 2019
Emerging Transistor Technologies Capable of Terahertz Amplification: A Way to Re-Engineer Terahertz Radar SensorsMladen Božanić, Saurabh SinhaPlos Computational Biology|September 27, 2018
An information theoretic treatment of sequence-to-expression modelingFarzaneh Khajouei, Saurabh SinhaNucleic Acids Research|September 11, 2021
Deciphering enhancer sequence using thermodynamics-based models and convolutional neural networksPayam Dibaeinia, Saurabh SinhaPageof 28