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Journal of Computational Chemistry|October 7, 2016
Multiple program/multiple data molecular dynamics method with multiple time step integrator for large biological systemsJaewoon Jung, Yuji SugitaThe Journal of Chemical Physics|December 23, 2020
Group-based evaluation of temperature and pressure for molecular dynamics simulation with a large time stepJaewoon Jung, Yuji SugitaThe Journal of Chemical Physics|March 11, 2025
Langevin integration for isothermal-isobaric condition with a large time stepJaewoon Jung, Yuji SugitaNature Communications|April 20, 2024
GENESIS CGDYN: large-scale coarse-grained MD simulation with dynamic load balancing for heterogeneous biomolecular systemsJaewoon Jung, Cheng Tan, Yuji SugitaJournal of Chemical Theory and Computation|November 24, 2015
Surface-Tension Replica-Exchange Molecular Dynamics Method for Enhanced Sampling of Biological Membrane SystemsTakaharu Mori, Jaewoon Jung, Yuji SugitaBiophysical Chemistry|January 3, 2025
Structural dynamics of a designed peptide pore under an external electric fieldAi Niitsu, Jaewoon Jung, Yuji SugitaJournal of Chemical Theory and Computation|November 24, 2018
Optimal Temperature Evaluation in Molecular Dynamics Simulations with a Large Time StepJaewoon Jung, Chigusa Kobayashi, Yuji SugitaJournal of Computational Chemistry|August 13, 2013
Efficient lookup table using a linear function of inverse distance squaredJaewoon Jung, Takaharu Mori, Yuji SugitaJournal of Computational Chemistry|May 4, 2023
Acceleration of generalized replica exchange with solute tempering simulations of large biological systems on massively parallel supercomputerJaewoon Jung, Chigusa Kobayashi, Yuji SugitaJournal of Computational Chemistry|March 25, 2014
Midpoint cell method for hybrid (MPI+OpenMP) parallelization of molecular dynamics simulationsJaewoon Jung, Takaharu Mori, Yuji SugitaPageof 21