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Scientific Reports|January 11, 2022
In silico analysis of local RNA secondary structure in influenza virus A, B and C finds evidence of widespread ordered stability but little evidence of significant covariationJake M Peterson, Collin A O'Leary, Walter N Moss
Methodsx|July 14, 2023
Discovery of RNA secondary structural motifs using sequence-ordered thermodynamic stability and comparative sequence analysisJake M Peterson, Collin A O'Leary, Evelyn C Coppenbarger, et al.
Biochemistry|May 10, 2024
Structure of the SARS-CoV-2 Frameshift Stimulatory Element with an Upstream Multibranch LoopJake M Peterson, Scott T Becker, Collin A O'Leary, et al.
Plos One|January 18, 2024
Identification of MYC intron 2 regions that modulate expressionVan S Tompkins, Zheng Xue, Jake M Peterson, et al.
International Journal of Molecular Sciences|March 10, 2022
Secondary Structure of Influenza A Virus Genomic Segment 8 RNA Folded in a Cellular EnvironmentBarbara Szutkowska, Klaudia Wieczorek, Ryszard Kierzek, et al.
The Journal of Biological Chemistry|October 24, 2021
Universal and strain specific structure features of segment 8 genomic RNA of influenza A virus-application of 4-thiouridine photocrosslinkingMarta Soszynska-Jozwiak, Maciej Pszczola, Julita Piasecka, et al.
Biorxiv : the Preprint Server for Biology|June 9, 2020
An in silico map of the SARS-CoV-2 RNA StructuromeRyan J Andrews, Jake M Peterson, Hafeez S Haniff, et al.
Cellular and Molecular Life Sciences : CMLS|May 2, 2023
In vivo secondary structural analysis of Influenza A virus genomic RNABarbara Mirska, Tomasz Woźniak, Dagny Lorent, et al.
NAR Genomics and Bioinformatics|May 28, 2021
A map of the SARS-CoV-2 RNA structuromeRyan J Andrews, Collin A O'Leary, Van S Tompkins, et al.
Antiviral Research|June 26, 2024
Targeting sgRNA N secondary structure as a way of inhibiting SARS-CoV-2 replicationAgnieszka Baliga-Gil, Marta Soszynska-Jozwiak, Agnieszka Ruszkowska, et al.
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