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Biorxiv : the Preprint Server for Biology|March 11, 2026
The Virtual Biotech: A Multi-Agent AI Framework for Therapeutic Discovery and DevelopmentHarrison G Zhang, Peter Eckmann, Jiacheng Miao, et al.Nature|March 20, 2025
Optimizing generative AI by backpropagating language model feedbackMert Yuksekgonul, Federico Bianchi, Joseph Boen, et al.Plos One|March 8, 2023
PreprintMatch: A tool for preprint to publication detection shows global inequities in scientific publicationPeter Eckmann, Anita BandrowskiBiorxiv : the Preprint Server for Biology|July 15, 2025
Spatial multi-omics and deep learning reveal fingerprints of immunotherapy response and resistance in hepatocellular carcinomaZhenqin Wu, Joseph Boen, Sonali Jindal, et al.Journal of Chemical Information and Modeling|July 1, 2024
Ligand-Based Compound Activity Prediction via Few-Shot LearningPeter Eckmann, Jake Anderson, Rose Yu, et al.Arxiv|December 11, 2023
Target-Free Compound Activity Prediction via Few-Shot LearningPeter Eckmann, Jake Anderson, Michael K Gilson, et al.Nucleic Acids Research|November 12, 2022
The Antibody Registry: ten years of registering antibodiesAnita Bandrowski, Mason Pairish, Peter Eckmann, et al.Nature Biomedical Engineering|December 6, 2024
Simple and effective embedding model for single-cell biology built from ChatGPTYiqun Chen, James ZouNature Methods|September 30, 2025
InterPLM: discovering interpretable features in protein language models via sparse autoencodersElana Simon, James ZouProceedings of Machine Learning Research|October 4, 2022
LIMO: Latent Inceptionism for Targeted Molecule GenerationPeter Eckmann, Kunyang Sun, Bo Zhao, et al.Pageof 18