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Nucleic Acids Research|October 4, 2021
CRISPR-Cas systems are widespread accessory elements across bacterial and archaeal plasmidsRafael Pinilla-Redondo, Jakob Russel, David Mayo-Muñoz, et al.
NPJ Biofilms and Microbiomes|October 8, 2021
Biofilms can act as plasmid reserves in the absence of plasmid specific selectionHenriette Lyng Røder, Urvish Trivedi, Jakob Russel, et al.
Microbiome|August 10, 2020
Environmental shaping of the bacterial and fungal community in infant bed dust and correlations with the airway microbiotaShashank Gupta, Mathis H Hjelmsø, Jenni Lehtimäki, et al.
NPJ Biofilms and Microbiomes|July 20, 2022
Biofilm cultivation facilitates coexistence and adaptive evolution in an industrial bacterial communityNathalie N S E Henriksen, Mads Frederik Hansen, Heiko T Kiesewalter, et al.
Proceedings of the National Academy of Sciences of the United States of America|November 23, 2018
<i>Staphylococcus aureus</i> coagulases are exploitable yet stable public goods in clinically relevant conditionsUrvish Trivedi, Jonas S Madsen, Jake Everett, et al.
Microbiome|May 10, 2024
Co-localization of antibiotic resistance genes is widespread in the infant gut microbiome and associates with an immature gut microbial compositionXuanji Li, Asker Brejnrod, Urvish Trivedi, et al.
NPJ Biofilms and Microbiomes|March 20, 2025
Prophages in the infant gut are pervasively induced and may modulate the functionality of their hostsTamsin A Redgwell, Jonathan Thorsen, Marie-Agnès Petit, et al.
Nature Communications|July 8, 2024
MAGinator enables accurate profiling of de novo MAGs with strain-level phylogeniesTrine Zachariasen, Jakob Russel, Charisse Petersen, et al.
Cell Host & Microbe|April 22, 2021
The infant gut resistome associates with E. coli, environmental exposures, gut microbiome maturity, and asthma-associated bacterial compositionXuanji Li, Jakob Stokholm, Asker Brejnrod, et al.
Clinical and Experimental Allergy : Journal of the British Society for Allergy and Clinical Immunology|October 18, 2023
Fungi and bacteria in the beds of rural and urban infants correlate with later risk of atopic diseasesJenni Lehtimäki, Shashank Gupta, Mathis Hjelmsø, et al.
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