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Journal of Cheminformatics|January 17, 2017
Scaffold analysis of PubChem database as background for hierarchical scaffold-based visualizationJakub Velkoborsky, David HokszaIEEE/ACM Transactions on Computational Biology and Bioinformatics|September 11, 2015
Multiple 3D RNA Structure Superposition Using Neighbor JoiningDavid Hoksza, Daniel SvozilJournal of Cheminformatics|May 2, 2015
Improving protein-ligand binding site prediction accuracy by classification of inner pocket points using local featuresRadoslav Krivák, David HokszaBMC Bioinformatics|November 17, 2017
TRAVeLer: a tool for template-based RNA secondary structure visualizationRichard Elias, David HokszaBioinformatics (Oxford, England)|May 22, 2012
Efficient RNA pairwise structure comparison by SETTER methodDavid Hoksza, Daniel SvozilJournal of Cheminformatics|August 16, 2018
P2Rank: machine learning based tool for rapid and accurate prediction of ligand binding sites from protein structureRadoslav Krivák, David HokszaBMC Bioinformatics|December 16, 2017
Utilizing knowledge base of amino acids structural neighborhoods to predict protein-protein interaction sitesJan Jelínek, Petr Škoda, David HokszaBMC Bioinformatics|August 13, 2015
MultiSETTER: web server for multiple RNA structure comparisonPetr Čech, David Hoksza, Daniel SvozilNucleic Acids Research|June 14, 2012
SETTER: web server for RNA structure comparisonPetr Cech, Daniel Svozil, David HokszaProteome Science|December 15, 2011
SProt: sphere-based protein structure similarity algorithmJakub Galgonek, David Hoksza, Tomáš SkopalPageof 4