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Protein Science : a Publication of the Protein Society|May 28, 2009
Motif-directed flexible backbone design of functional interactionsJames J Havranek, David BakerJournal of Molecular Biology|October 27, 2004
A simple physical model for the prediction and design of protein-DNA interactionsJames J Havranek, Carlos M Duarte, David BakerNucleic Acids Research|October 26, 2005
Protein-DNA binding specificity predictions with structural modelsAlexandre V Morozov, James J Havranek, David Baker, et al.The Journal of Biological Chemistry|July 31, 2010
Specificity in computational protein designJames J HavranekNucleic Acids Research|May 4, 2010
Computational reprogramming of homing endonuclease specificity at multiple adjacent base pairsJustin Ashworth, Gregory K Taylor, James J Havranek, et al.Nature|June 2, 2006
Computational redesign of endonuclease DNA binding and cleavage specificityJustin Ashworth, James J Havranek, Carlos M Duarte, et al.Proceedings of the National Academy of Sciences of the United States of America|February 7, 2012
Automated selection of stabilizing mutations in designed and natural proteinsBenjamin Borgo, James J HavranekProtein Science : a Publication of the Protein Society|January 11, 2014
Motif-directed redesign of enzyme specificityBenjamin Borgo, James J HavranekChembiochem : a European Journal of Chemical Biology|May 26, 2007
Rescue of degradation-prone mutants of the FK506-rapamycin binding (FRB) protein with chemical ligandsKryn Stankunas, J Henri Bayle, James J Havranek, et al.Nature Structural Biology|December 3, 2002
Automated design of specificity in molecular recognitionJames J Havranek, Pehr B HarburyPageof 123