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BMC Genomics|November 26, 2010
In silico reversal of repeat-induced point mutation (RIP) identifies the origins of repeat families and uncovers obscured duplicated genesJames K Hane, Richard P OliverBMC Bioinformatics|November 19, 2008
RIPCAL: a tool for alignment-based analysis of repeat-induced point mutations in fungal genomic sequencesJames K Hane, Richard P OliverInternational Journal of Molecular Sciences|October 28, 2023
The Molecular Docking of MAX Fungal Effectors with Plant HMA Domain-Binding ProteinsLina Rozano, James K Hane, Ricardo L ManceraGenome Biology and Evolution|June 12, 2016
OcculterCut: A Comprehensive Survey of AT-Rich Regions in Fungal GenomesAlison C Testa, Richard P Oliver, James K HaneMicrobial Genomics|September 1, 2021
Remote homology clustering identifies lowly conserved families of effector proteins in plant-pathogenic fungiDarcy A B Jones, Paula M Moolhuijzen, James K HaneInternational Journal of Molecular Sciences|April 13, 2023
Ab Initio Modelling of the Structure of ToxA-like and MAX Fungal Effector ProteinsLina Rozano, Yvonne M Mukuka, James K Hane, et al.G3 (Bethesda, Md.)|April 17, 2013
Resequencing and comparative genomics of Stagonospora nodorum: sectional gene absence and effector discoveryRobert Andrew Syme, James K Hane, Timothy L Friesen, et al.Molecular Biotechnology|March 20, 2023
Template-Based Modelling of the Structure of Fungal Effector ProteinsLina Rozano, Darcy A B Jones, James K Hane, et al.BMC Genomics|April 19, 2015
CodingQuarry: highly accurate hidden Markov model gene prediction in fungal genomes using RNA-seq transcriptsAlison C Testa, James K Hane, Simon R Ellwood, et al.Current Opinion in Microbiology|February 21, 2018
Bioinformatic prediction of plant-pathogenicity effector proteins of fungiDarcy Ab Jones, Stefania Bertazzoni, Chala J Turo, et al.Pageof 6