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Plos Computational Biology|March 18, 2022
Metaproteomics as a tool for studying the protein landscape of human-gut bacterial speciesMoses Stamboulian, Jamie Canderan, Yuzhen YeHealth Information Science and Systems|September 2, 2025
Identification and applications of disease-associated differential human and bacterial proteins with metaproteomic evidenceJamie Canderan, Moses Stamboulian, Yuzhen YeJournal of Proteome Research|January 23, 2023
MetaProD: A Highly-Configurable Mass Spectrometry Analyzer for Multiplexed Proteomic and Metaproteomic DataJamie Canderan, Moses Stamboulian, Yuzhen YeScientific Reports|April 22, 2025
Identification of microbial species and proteins associated with colorectal cancer by reanalyzing CPTAC proteomic datasetsJamie Canderan, Yuzhen YeMicrobiome|April 2, 2021
Using high-abundance proteins as guides for fast and effective peptide/protein identification from human gut metaproteomic dataMoses Stamboulian, Sujun Li, Yuzhen YePlos Computational Biology|October 30, 2020
Model-based and phylogenetically adjusted quantification of metabolic interaction between microbial speciesTony J Lam, Moses Stamboulian, Wontack Han, et al.Bioinformatics (Oxford, England)|July 14, 2020
The ortholog conjecture revisited: the value of orthologs and paralogs in function predictionMoses Stamboulian, Rafael F Guerrero, Matthew W Hahn, et al.Proceedings. IEEE International Conference on Bioinformatics and Biomedicine|November 22, 2011
Identification and Quantification of Abundant Species from Pyrosequences of 16S rRNA by Consensus AlignmentYuzhen YeInternational Journal of Molecular Sciences|September 9, 2014
Identification of diversity-generating retroelements in human microbiomesYuzhen YeBioinformatics (Oxford, England)|August 31, 2015
Utilizing de Bruijn graph of metagenome assembly for metatranscriptome analysisYuzhen Ye, Haixu TangPageof 11