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Current Opinion in Biotechnology|March 26, 2021
Modeling the energy metabolism in immune cellsStefan Schuster, Jan Ewald, Christoph KaletaBiochemical Society Transactions|July 30, 2017
Deciphering the regulation of metabolism with dynamic optimization: an overview of recent advancesJan Ewald, Martin Bartl, Christoph KaletaPlos Computational Biology|February 18, 2017
Optimality principles reveal a complex interplay of intermediate toxicity and kinetic efficiency in the regulation of prokaryotic metabolismJan Ewald, Martin Bartl, Thomas Dandekar, et al.Metabolites|May 1, 2015
Footprints of optimal protein assembly strategies in the operonic structure of prokaryotesJan Ewald, Martin Kötzing, Martin Bartl, et al.NPJ Systems Biology and Applications|July 18, 2024
Including glutamine in a resource allocation model of energy metabolism in cancer and yeast cellsJan Ewald, Ziyang He, Wassili Dimitriew, et al.Open Biology|November 3, 2020
Modelling population dynamics in a unicellular social organism community using a minimal model and evolutionary game theoryRavindra Garde, Jan Ewald, Ákos T Kovács, et al.Nature Computational Science|December 9, 2025
AUTOENCODIX: a generalized and versatile framework to train and evaluate autoencoders for biological representation learning and beyondMaximilian Josef Joas, Neringa Jurenaite, Dušan Praščević, et al.Journal of the Royal Society, Interface|July 14, 2017
Modelling the host-pathogen interactions of macrophages and Candida albicans using Game Theory and dynamic optimizationSybille Dühring, Jan Ewald, Sebastian Germerodt, et al.Cellular and Molecular Life Sciences : CMLS|November 29, 2019
Trends in mathematical modeling of host-pathogen interactionsJan Ewald, Patricia Sieber, Ravindra Garde, et al.Plos Computational Biology|December 13, 2021
Dynamic optimization reveals alveolar epithelial cells as key mediators of host defense in invasive aspergillosisJan Ewald, Flora Rivieccio, Lukáš Radosa, et al.Pageof 2