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Methods in Molecular Biology (Clifton, N.J.)|February 26, 2017
Investigating Protein-Peptide Interactions Using the Schrödinger Computational SuiteJas Bhachoo, Thijs BeumingBioinformatics (Oxford, England)|February 28, 2004
A knowledge-based scale for the analysis and prediction of buried and exposed faces of transmembrane domain proteinsThijs Beuming, Harel WeinsteinJournal of Chemical Information and Modeling|November 6, 2012
Current assessment of docking into GPCR crystal structures and homology models: successes, challenges, and guidelinesThijs Beuming, Woody ShermanProtein Engineering, Design & Selection : PEDS|April 12, 2005
Modeling membrane proteins based on low-resolution electron microscopy maps: a template for the TM domains of the oxalate transporter OxlTThijs Beuming, Harel WeinsteinCurrent Topics in Medicinal Chemistry|April 18, 2017
Calculating Water Thermodynamics in the Binding Site of Proteins - Applications of WaterMap to Drug DiscoveryDaniel Cappel, Woody Sherman, Thijs BeumingACS Medicinal Chemistry Letters|June 6, 2014
Hydration Site Thermodynamics Explain SARs for Triazolylpurines Analogues Binding to the A2A ReceptorChristopher Higgs, Thijs Beuming, Woody ShermanProtein Science : a Publication of the Protein Society|July 2, 2009
High-energy water sites determine peptide binding affinity and specificity of PDZ domainsThijs Beuming, Ramy Farid, Woody ShermanMolecular Pharmacology|August 2, 2006
A comprehensive structure-based alignment of prokaryotic and eukaryotic neurotransmitter/Na+ symporters (NSS) aids in the use of the LeuT structure to probe NSS structure and functionThijs Beuming, Lei Shi, Jonathan A Javitch, et al.Journal of Chemical Information and Modeling|April 5, 2018
Large-Scale Validation of Mixed-Solvent Simulations to Assess Hotspots at Protein-Protein Interaction InterfacesPhani Ghanakota, Herman van Vlijmen, Woody Sherman, et al.Journal of Chemical Information and Modeling|June 27, 2013
Improved docking of polypeptides with GlideIvan Tubert-Brohman, Woody Sherman, Matt Repasky, et al.Pageof 5