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Nature Structural & Molecular Biology|August 1, 2018
Analyses of mRNA structure dynamics identify embryonic gene regulatory programsJean-Denis Beaudoin, Eva Maria Novoa, Charles E Vejnar, et al.
BMC Genomics|October 31, 2025
Integrating single-cell RNA-seq datasets with substantial batch effectsKarin Hrovatin, Amir Ali Moinfar, Luke Zappia, et al.
Communications Biology|June 7, 2025
Genome-wide identification and analysis of recurring patterns of epigenetic variation across individualsJennifer Zou, Emily Maciejewski, Jason Ernst
Biorxiv : the Preprint Server for Biology|December 11, 2023
Cross-species and tissue imputation of species-level DNA methylation samples across mammalian speciesEmily Maciejewski, Steve Horvath, Jason Ernst
Genome Biology|May 20, 2025
CMImpute: cross-species and tissue imputation of species-level DNA methylation samples across mammalian speciesEmily Maciejewski, Steve Horvath, Jason Ernst
Nucleic Acids Research|July 9, 2018
Loose ends: almost one in five human genes still have unresolved coding statusFederico Abascal, David Juan, Irwin Jungreis, et al.
Genome Research|May 4, 2013
Arboretum: reconstruction and analysis of the evolutionary history of condition-specific transcriptional modulesSushmita Roy, Ilan Wapinski, Jenna Pfiffner, et al.
Life Science Alliance|May 29, 2019
Rate of brain aging and APOE ε4 are synergistic risk factors for Alzheimer's diseaseChristin A Glorioso, Andreas R Pfenning, Sam S Lee, et al.
Nature Communications|January 17, 2024
Leveraging single-cell ATAC-seq and RNA-seq to identify disease-critical fetal and adult brain cell typesSamuel S Kim, Buu Truong, Karthik Jagadeesh, et al.
Nature|March 1, 2005
Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammalsXiaohui Xie, Jun Lu, E J Kulbokas, et al.
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