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ACS Omega|May 8, 2018
RosettaLigandEnsemble: A Small-Molecule Ensemble-Driven Docking ApproachDarwin Yu Fu, Jens MeilerMicrobiology Spectrum|June 25, 2015
Antibodies: Computer-Aided Prediction of Structure and Design of FunctionAlexander M Sevy, Jens MeilerJournal of Computer-Aided Molecular Design|January 2, 2016
Autocorrelation descriptor improvements for QSAR: 2DA_Sign and 3DA_SignGregory Sliwoski, Jeffrey Mendenhall, Jens MeilerBiochemistry|September 13, 2011
Design of native-like proteins through an exposure-dependent environment potentialSamuel DeLuca, Brent Dorr, Jens MeilerIEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology Proceedings. IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology|October 18, 2016
Improved prediction of trans-membrane spans in proteins using an Artificial Neural NetworkJulia Koehler, Ralf Mueller, Jens MeilerProteins|December 30, 2003
Strand-loop-strand motifs: prediction of hairpins and diverging turns in proteinsMichael Kuhn, Jens Meiler, David BakerJournal of Chemical Information and Modeling|June 11, 2025
RosettaAMRLD: A Reaction-Driven Approach for Structure-Based Drug Design from Combinatorial Libraries with Monte Carlo Metropolis AlgorithmsYidan Tang, Rocco Moretti, Jens MeilerChemical Biology & Drug Design|February 11, 2012
Prediction of HIV-1 protease/inhibitor affinity using RosettaLigandGordon Lemmon, Kristian Kaufmann, Jens MeilerIEEE ... International Conference on Computational Advances in Bio and Medical Sciences : [Proceedings]. IEEE International Conference on Computational Advances in Bio and Medical Sciences|November 8, 2016
bcl::Cluster : A method for clustering biological molecules coupled with visualization in the Pymol Molecular Graphics SystemNathan Alexander, Nils Woetzel, Jens MeilerPlos One|July 25, 2015
Fully Flexible Docking of Medium Sized Ligand Libraries with RosettaLigandSamuel DeLuca, Karen Khar, Jens MeilerPageof 44