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Biophysical Journal|August 21, 2007
Exact low-force kinetics from high-force single-molecule unfolding eventsJeremiah Nummela, Ioan AndricioaeiBiophysical Journal|February 17, 2009
Energy landscape for DNA rotation and sliding through a phage portalJeremiah Nummela, Ioan AndricioaeiThe Journal of Chemical Physics|January 22, 2008
Entropy-energy decomposition from nonequilibrium work trajectoriesJeremiah Nummela, Faten Yassin, Ioan AndricioaeiThe Journal of Membrane Biology|December 15, 2010
A comparative study on the ability of two implicit solvent lipid models to predict transmembrane helix tilt anglesAaron Frank, Ioan AndricioaeiJournal of Molecular Biology|June 28, 2005
Repetitive pulling catalyzes co-translocational unfolding of barnase during import through a mitochondrial porePu Tian, Ioan AndricioaeiBiophysical Journal|August 5, 2010
Free energy calculations reveal rotating-ratchet mechanism for DNA supercoil relaxation by topoisomerase IB and its inhibitionJeff Wereszczynski, Ioan AndricioaeiThe Journal of Chemical Physics|October 19, 2005
A skewed-momenta method to efficiently generate conformational-transition trajectoriesJames MacFadyen, Ioan AndricioaeiProceedings of the National Academy of Sciences of the United States of America|October 25, 2006
On structural transitions, thermodynamic equilibrium, and the phase diagram of DNA and RNA duplexes under torque and tensionJeff Wereszczynski, Ioan AndricioaeiThe Journal of Physical Chemistry. C, Nanomaterials and Interfaces|January 2, 2015
Single-Walled Carbon Nanotubes Modulate the B- to A-DNA TransitionGavin Bascom, Ioan AndricioaeiThe Journal of Chemical Physics|September 9, 2018
Advances in milestoning. II. Calculating time-correlation functions from milestoning using stochastic path integralsGianmarc Grazioli, Ioan AndricioaeiPageof 8