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Molecular & Cellular Proteomics : MCP|June 14, 2006
DivergentSet, a tool for picking non-redundant sequences from large sequence collectionsJeremy Widmann, Micah Hamady, Rob KnightGenome Biology|August 19, 2008
MotifCluster: an interactive online tool for clustering and visualizing sequences using shared motifsMicah Hamady, Jeremy Widmann, Shelley D Copley, et al.Genome Research|April 23, 2009
Microbial community profiling for human microbiome projects: Tools, techniques, and challengesMicah Hamady, Rob KnightBMC Bioinformatics|August 9, 2006
UniFrac--an online tool for comparing microbial community diversity in a phylogenetic contextCatherine Lozupone, Micah Hamady, Rob KnightThe ISME Journal|August 28, 2009
Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip dataMicah Hamady, Catherine Lozupone, Rob KnightBMC Bioinformatics|October 28, 2006
Using the nucleotide substitution rate matrix to detect horizontal gene transferMicah Hamady, M D Betterton, Rob KnightBMC Bioinformatics|January 6, 2006
Fast-Find: a novel computational approach to analyzing combinatorial motifsMicah Hamady, Erin Peden, Rob Knight, et al.Methods in Molecular Biology (Clifton, N.J.)|April 21, 2009
CodonExplorer: an interactive online database for the analysis of codon usage and sequence compositionJesse Zaneveld, Micah Hamady, Noboru Sueoka, et al.Proceedings of the National Academy of Sciences of the United States of America|November 14, 2008
The influence of sex, handedness, and washing on the diversity of hand surface bacteriaNoah Fierer, Micah Hamady, Christian L Lauber, et al.Applied and Environmental Microbiology|June 9, 2009
Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scaleChristian L Lauber, Micah Hamady, Rob Knight, et al.Pageof 90