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Nature Reviews. Cancer|August 12, 2011
Dysregulated pH: a perfect storm for cancer progressionBradley A Webb, Michael Chimenti, Matthew P Jacobson, et al.Proteins|December 13, 2006
Assignment of polar states for protein amino acid residues using an interaction cluster decomposition algorithm and its application to high resolution protein structure modelingXin Li, Matthew P Jacobson, Kai Zhu, et al.Journal of Medicinal Chemistry|January 20, 2006
Novel procedure for modeling ligand/receptor induced fit effectsWoody Sherman, Tyler Day, Matthew P Jacobson, et al.The Journal of Biological Chemistry|November 10, 2011
Divergent evolution in enolase superfamily: strategies for assigning functionsJohn A Gerlt, Patricia C Babbitt, Matthew P Jacobson, et al.Bioorganic & Medicinal Chemistry Letters|May 30, 2009
Improving the species cross-reactivity of an antibody using computational designChristopher J Farady, Benjamin D Sellers, Matthew P Jacobson, et al.Chemistry & Biology|April 19, 2008
Toward deciphering the code to aminergic G protein-coupled receptor drug designEdwin S Tan, Eli S Groban, Matthew P Jacobson, et al.Nucleic Acids Research|June 4, 2025
A role for pH dynamics regulating transcription factor DNA-binding selectivityKyle P Kisor, Diego Garrido Ruiz, Matthew P Jacobson, et al.Journal of Medicinal Chemistry|March 24, 2021
A Crowding Barrier to Protein Inhibition in Colloidal AggregatesParnian Lak, Henry O'Donnell, Xuewen Du, et al.Proteins|April 22, 2009
Automated site preparation in physics-based rescoring of receptor ligand complexesChaya S Rapp, Cheryl Schonbrun, Matthew P Jacobson, et al.Journal of Chemical Information and Modeling|July 26, 2011
A molecular mechanics approach to modeling protein-ligand interactions: relative binding affinities in congeneric seriesChaya Rapp, Chakrapani Kalyanaraman, Aviva Schiffmiller, et al.Pageof 18