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Structure (London, England : 1993)|May 15, 2012
An efficient null model for conformational fluctuations in proteinsTim Harder, Mikael Borg, Sandro Bottaro, et al.Journal of Molecular Biology|April 14, 2005
Recognizing and defining true Ras binding domains II: in silico prediction based on homology modelling and energy calculationsChristina Kiel, Sabine Wohlgemuth, Frederic Rousseau, et al.Proceedings of the National Academy of Sciences of the United States of America|June 27, 2008
A generative, probabilistic model of local protein structureWouter Boomsma, Kanti V Mardia, Charles C Taylor, et al.Biophysical Journal|April 26, 2026
Disentangling the role of epitope spacing and antibody flexibility on avidity: A quantitative model for competition and bivalency in biosensor assaysNathalie Wyss, Christoffer Riis, Hanne Sophie Karkov, et al.Proceedings of the National Academy of Sciences of the United States of America|July 12, 2005
Prediction of water and metal binding sites and their affinities by using the Fold-X force fieldJoost W H Schymkowitz, Frederic Rousseau, Ivo C Martins, et al.Proceedings of the National Academy of Sciences of the United States of America|September 7, 2014
Equilibrium simulations of proteins using molecular fragment replacement and NMR chemical shiftsWouter Boomsma, Pengfei Tian, Jes Frellsen, et al.Plos Computational Biology|April 5, 2008
Genome-wide prediction of SH2 domain targets using structural information and the FoldX algorithmIgnacio E Sánchez, Pedro Beltrao, Francois Stricher, et al.Journal of Chemical Theory and Computation|November 21, 2015
Probabilistic Determination of Native State Ensembles of ProteinsSimon Olsson, Beat Rolf Vögeli, Andrea Cavalli, et al.Journal of Chemical Information and Modeling|August 29, 2022
Lipid Modulation of a Class B GPCR: Elucidating the Modulatory Role of PI(4,5)P2 LipidsLisbeth R Kjølbye, Lars Sørensen, Jun Yan, et al.Journal of Chemical Theory and Computation|November 19, 2015
Robust Estimation of Diffusion-Optimized Ensembles for Enhanced SamplingPengfei Tian, Sigurdur Æ Jónsson, Jesper Ferkinghoff-Borg, et al.Pageof 6