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BMC Bioinformatics|January 3, 2012
MotifMap: integrative genome-wide maps of regulatory motif sites for model speciesKenneth Daily, Vishal R Patel, Paul Rigor, et al.
A&A Practice|August 12, 2025
Domain Knowledge Inclusive Monotonic Neural Network Guides Patient-Specific Induction of General Anesthesia DosingKathryn Sarullo, Muntaha Samad, Samir Kendale, et al.
BMC Bioinformatics|December 29, 2020
Auto3DCryoMap: an automated particle alignment approach for 3D cryo-EM density map reconstructionAdil Al-Azzawi, Anes Ouadou, Ye Duan, et al.
Briefings in Bioinformatics|December 1, 2021
Artificial intelligence in the prediction of protein-ligand interactions: recent advances and future directionsAshwin Dhakal, Cole McKay, John J Tanner, et al.
International Journal of Molecular Sciences|April 25, 2020
Bioinformatics Methods for Mass Spectrometry-Based Proteomics Data AnalysisChen Chen, Jie Hou, John J Tanner, et al.
BMC Molecular Biology|November 25, 2015
Genes targeted by the Hedgehog-signaling pathway can be regulated by Estrogen related receptor βYuan Lu, Jilong Li, Jianlin Cheng, et al.
Nucleic Acids Research|May 8, 2009
NNcon: improved protein contact map prediction using 2D-recursive neural networksAllison N Tegge, Zheng Wang, Jesse Eickholt, et al.
Proteins|June 23, 2009
Prediction of global and local quality of CASP8 models by MULTICOM seriesJianlin Cheng, Zheng Wang, Allison N Tegge, et al.
BMC Molecular Biology|December 3, 2015
Messenger RNA profile analysis deciphers new Esrrb responsive genes in prostate cancer cellsYuan Lu, Jilong Li, Jianlin Cheng, et al.
Scientific Reports|June 11, 2021
DNCON2_Inter: predicting interchain contacts for homodimeric and homomultimeric protein complexes using multiple sequence alignments of monomers and deep learningFarhan Quadir, Raj S Roy, Randal Halfmann, et al.
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