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The Journal of Cell Biology|November 16, 2021
High-throughput single-cell epigenomic profiling by targeted insertion of promoters (TIP-seq)Daniel A Bartlett, Vishnu Dileep, Tetsuya Handa, et al.Bioinformatics (Oxford, England)|November 27, 2018
RT States: systematic annotation of the human genome using cell type-specific replication timing programsAxel Poulet, Ben Li, Tristan Dubos, et al.Plos One|November 19, 2011
DNA replication timing is maintained genome-wide in primary human myoblasts independent of D4Z4 contraction in FSH muscular dystrophyBenjamin D Pope, Koji Tsumagari, Dana Battaglia, et al.Genome Research|February 14, 2015
Joint annotation of chromatin state and chromatin conformation reveals relationships among domain types and identifies domains of cell-type-specific expressionMaxwell W Libbrecht, Ferhat Ay, Michael M Hoffman, et al.Plos Pathogens|April 13, 2012
Productive hepatitis C virus infection of stem cell-derived hepatocytes reveals a critical transition to viral permissiveness during differentiationXianfang Wu, Jason M Robotham, Emily Lee, et al.Plos Computational Biology|October 27, 2011
Replication timing: a fingerprint for cell identity and pluripotencyTyrone Ryba, Ichiro Hiratani, Takayo Sasaki, et al.Proceedings of the National Academy of Sciences of the United States of America|November 6, 2009
G9a selectively represses a class of late-replicating genes at the nuclear peripheryTomoki Yokochi, Kristina Poduch, Tyrone Ryba, et al.Genome Research|August 23, 2019
Replication timing networks reveal a link between transcription regulatory circuits and replication timing controlJuan Carlos Rivera-Mulia, Sebo Kim, Haitham Gabr, et al.Plos Genetics|May 3, 2014
Copy number variation is a fundamental aspect of the placental genomeRoberta L Hannibal, Edward B Chuong, Juan Carlos Rivera-Mulia, et al.Cell Systems|June 25, 2018
Continuous-Trait Probabilistic Model for Comparing Multi-species Functional Genomic DataYang Yang, Quanquan Gu, Yang Zhang, et al.Pageof 16