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Bioinformatics (Oxford, England)|January 24, 2007
Designing patterns for profile HMM searchYanni Sun, Jeremy BuhlerBioinformatics (Oxford, England)|September 3, 2016
Assemble CRISPRs from metagenomic sequencing dataJikai Lei, Yanni SunBioinformatics (Oxford, England)|February 14, 2022
Reconstructing viral haplotypes using long readsDehan Cai, Yanni SunBioinformatics (Oxford, England)|June 16, 2014
miR-PREFeR: an accurate, fast and easy-to-use plant miRNA prediction tool using small RNA-Seq dataJikai Lei, Yanni SunComputational Systems Bioinformatics. Computational Systems Bioinformatics Conference|August 1, 2009
Designing secondary structure profiles for fast ncRNA identificationYanni Sun, Jeremy BuhlerIEEE/ACM Transactions on Computational Biology and Bioinformatics|May 2, 2009
Designing patterns and profiles for faster HMM searchYanni Sun, Jeremy BuhlerBMC Bioinformatics|February 2, 2013
Shape and secondary structure prediction for ncRNAs including pseudoknots based on linear SVMRujira Achawanantakun, Yanni SunIEEE/ACM Transactions on Computational Biology and Bioinformatics|November 16, 2011
Designing filters for fast-known NcRNA identificationYanni Sun, Jeremy Buhler, Cheng YuanBioinformatics (Oxford, England)|September 26, 2024
VirTAXA: enhancing RNA virus taxonomic classification with remote homology search and tree-based validationYilin Zhu, Guowei Chen, Yanni SunBioinformatics (Oxford, England)|January 7, 2023
AccuVIR: an ACCUrate VIRal genome assembly tool for third-generation sequencing dataRunzhou Yu, Dehan Cai, Yanni SunPageof 17