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Bioinformatics (Oxford, England)|May 7, 2016
ProtPOS: a python package for the prediction of protein preferred orientation on a surfaceJimmy C F Ngai, Pui-In Mak, Shirley W I SiuMedicinal Chemistry Research : an International Journal for Rapid Communications on Design and Mechanisms of Action of Biologically Active Agents|August 9, 2016
Identification of novel natural compound inhibitors for human complement component 5a receptor by homology modeling and virtual screeningFaraz Shaikh, Shirley W I SiuBiomolecules|April 23, 2020
Machine Learning Approaches for Quality Assessment of Protein StructuresJiarui Chen, Shirley W I SiuLangmuir : the ACS Journal of Surfaces and Colloids|January 27, 2021
Effect of Concentration, Chain Length, Hydrophobicity, and an External Electric Field on the Growth of Mixed Alkanethiol Self-Assembled Monolayers: A Molecular Dynamics StudyPratiti Bhadra, Shirley W I SiuInternational Journal of Molecular Sciences|October 18, 2018
A Hybrid Cuckoo Search and Differential Evolution Approach to Protein⁻Ligand DockingHang Lin, Shirley W I SiuLangmuir : the ACS Journal of Surfaces and Colloids|June 28, 2019
Refined Empirical Force Field to Model Protein-Self-Assembled Monolayer Interactions Based on AMBER14 and GAFFPratiti Bhadra, Shirley W I SiuThe Journal of Physical Chemistry. B|August 27, 2009
Low free energy barrier for ion permeation through double-helical gramicidinShirley W I Siu, Rainer A BöckmannJournal of Structural Biology|November 23, 2006
Electric field effects on membranes: gramicidin A as a test groundShirley W I Siu, Rainer A BöckmannJournal of Chemical Information and Modeling|May 7, 2026
BERT-T6: Toward High-Accuracy T6SS Bacterial Toxin Identification Using a Protein Language ModelXianwei Mo, Jianxiu Cai, Shirley W I SiuBiochemistry and Molecular Biology Education : a Bimonthly Publication of the International Union of Biochemistry and Molecular Biology|June 14, 2016
PyMOL mControl: Manipulating molecular visualization with mobile devicesWendy W T Lam, Shirley W I SiuPageof 10