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International Journal of Molecular Sciences|December 6, 2019
DeepMiR2GO: Inferring Functions of Human MicroRNAs Using a Deep Multi-Label Classification ModelJiacheng Wang, Jingpu Zhang, Yideng Cai, et al.BMC Medical Informatics and Decision Making|December 21, 2019
MultiSourcDSim: an integrated approach for exploring disease similarityLei Deng, Danyi Ye, Junmin Zhao, et al.BMC Bioinformatics|November 13, 2020
DeepciRGO: functional prediction of circular RNAs through hierarchical deep neural networks using heterogeneous network featuresLei Deng, Wei Lin, Jiacheng Wang, et al.IEEE/ACM Transactions on Computational Biology and Bioinformatics|May 24, 2017
KATZLGO: Large-Scale Prediction of LncRNA Functions by Using the KATZ Measure Based on Multiple NetworksZuping Zhang, Jingpu Zhang, Chao Fan, et al.Journal of Chemical Information and Modeling|August 9, 2024
ncRNA Coding Potential Prediction Using BiLSTM and Transformer Encoder-Based ModelJingpu Zhang, Hao Lu, Ying Jiang, et al.BMC Bioinformatics|July 17, 2021
MSCFS: inferring circRNA functional similarity based on multiple data sourcesLiang Shu, Cheng Zhou, Xinxu Yuan, et al.Computational Biology and Chemistry|March 26, 2018
Probing the functions of long non-coding RNAs by exploiting the topology of global association and interaction networkLei Deng, Hongjie Wu, Chuyao Liu, et al.Bioinformatics (Oxford, England)|January 3, 2018
Ontological function annotation of long non-coding RNAs through hierarchical multi-label classificationJingpu Zhang, Zuping Zhang, Zixiang Wang, et al.Journal of Chemical Information and Modeling|June 9, 2023
ABLNCPP: Attention Mechanism-Based Bidirectional Long Short-Term Memory for Noncoding RNA Coding Potential PredictionLei Deng, Ying Jiang, Xiaowen Hu, et al.Plos One|September 8, 2017
A novel approach for predicting microbe-disease associations by bi-random walk on the heterogeneous networkShuai Zou, Jingpu Zhang, Zuping ZhangPageof 104