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Nature Communications|July 16, 2024
scSemiProfiler: Advancing large-scale single-cell studies through semi-profiling with deep generative models and active learningJingtao Wang, Gregory J Fonseca, Jun DingNature Communications|December 10, 2025
SIDISH integrates single-cell and bulk transcriptomics to identify high-risk cells and guide precision therapeutics through in silico perturbationYasmin Jolasun, Kailu Song, Yumin Zheng, et al.Cell Reports Methods|April 11, 2025
Efficient and scalable construction of clinical variable networks for complex diseases with RAMENYiwei Xiong, Jingtao Wang, Xiaoxiao Shang, et al.Nucleic Acids Research|December 17, 2025
DENetwork unveils non-differentially expressed genes with functional relevance across conditions through information flow perturbationBowen Zhao, Ting-Yi Su, Jingtao Wang, et al.Molecular Systems Biology|May 6, 2026
Dissecting and steering cell dynamics using spatially-informed RNA velocity with veloAgentVishvak Raghavan, Brent Yoon, Gregory J Fonseca, et al.Nature Communications|April 15, 2022
Interactive single-cell data analysis using CellarEuxhen Hasanaj, Jingtao Wang, Arjun Sarathi, et al.Nature Communications|November 26, 2025
scGALA advances graph link prediction-based cell alignment for comprehensive data integration and harmonizationGuo Jiang, Kailu Song, Gregory J Fonseca, et al.Bioinformatics Advances|March 2, 2026
AmalgaMo: flexible DNA motif mergingOrsolya Lapohos, Gregory J FonsecaCell Reports Methods|September 18, 2025
Computational tracking of cell origins using CellSexID from single-cell transcriptomesHuilin Tai, Qian Li, Jingtao Wang, et al.Frontiers in Psychology|February 16, 2024
Will wealth inequality decrease happiness?-Empirical evidence from ChinaJingtao WangPageof 145