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Journal of Computational Chemistry
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July 30, 2025
Feasibility of Combining Biomolecular Conformational Sampling Techniques for Molecular Dynamics Simulation
Jinzen Ikebe, Hidetoshi Kono
Plos Computational Biology
|
March 12, 2016
H3 Histone Tail Conformation within the Nucleosome and the Impact of K14 Acetylation Studied Using Enhanced Sampling Simulation
Jinzen Ikebe, Shun Sakuraba, Hidetoshi Kono
Journal of Computational Chemistry
|
October 30, 2013
Adaptive lambda square dynamics simulation: an efficient conformational sampling method for biomolecules
Jinzen Ikebe, Shun Sakuraba, Hidetoshi Kono
Biophysical Reviews
|
May 17, 2017
Enhanced sampling simulations to construct free-energy landscape of protein-partner substrate interaction
Jinzen Ikebe, Koji Umezawa, Junichi Higo
Biophysical Reviews
|
February 21, 2012
Enhanced and effective conformational sampling of protein molecular systems for their free energy landscapes
Junichi Higo, Jinzen Ikebe, Narutoshi Kamiya, et al.
Protein Science : a Publication of the Protein Society
|
November 18, 2010
Ab initio simulation of a 57-residue protein in explicit solvent reproduces the native conformation in the lowest free-energy cluster
Jinzen Ikebe, Daron M Standley, Haruki Nakamura, et al.
Journal of Agricultural and Food Chemistry
|
February 17, 2025
Computational Design of <i>Burkholderia cepacia</i> Lipase Mutants that Show Enhanced Stereoselectivity in the Production of l-Menthol
Jinzen Ikebe, Kazunori Yoshida, Satoru Ishihara, et al.
Scientific Reports
|
May 16, 2022
Author Correction: Enzyme modification using mutation site prediction method for enhancing the regioselectivity of substrate reaction sites
Jinzen Ikebe, Munenori Suzuki, Aya Komori, et al.
Biomolecules
|
June 28, 2014
Conformational Ensembles of an Intrinsically Disordered Protein pKID with and without a KIX Domain in Explicit Solvent Investigated by All-Atom Multicanonical Molecular Dynamics
Koji Umezawa, Jinzen Ikebe, Mitsunori Takano, et al.
Biopolymers
|
January 31, 2009
Conformational requirement on peptides to exert laminin's activities and search for protein segments with laminin's activities
Koji Umezawa, Jinzen Ikebe, Motoyoshi Nomizu, et al.
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of 2
Search research articles
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Showing results (1-10 of 15) with videos related to
Sort By:
Page
of 2
Journal of Computational Chemistry
|
July 30, 2025
Feasibility of Combining Biomolecular Conformational Sampling Techniques for Molecular Dynamics Simulation
Jinzen Ikebe, Hidetoshi Kono
Plos Computational Biology
|
March 12, 2016
H3 Histone Tail Conformation within the Nucleosome and the Impact of K14 Acetylation Studied Using Enhanced Sampling Simulation
Jinzen Ikebe, Shun Sakuraba, Hidetoshi Kono
Journal of Computational Chemistry
|
October 30, 2013
Adaptive lambda square dynamics simulation: an efficient conformational sampling method for biomolecules
Jinzen Ikebe, Shun Sakuraba, Hidetoshi Kono
Biophysical Reviews
|
May 17, 2017
Enhanced sampling simulations to construct free-energy landscape of protein-partner substrate interaction
Jinzen Ikebe, Koji Umezawa, Junichi Higo
Biophysical Reviews
|
February 21, 2012
Enhanced and effective conformational sampling of protein molecular systems for their free energy landscapes
Junichi Higo, Jinzen Ikebe, Narutoshi Kamiya, et al.
Protein Science : a Publication of the Protein Society
|
November 18, 2010
Ab initio simulation of a 57-residue protein in explicit solvent reproduces the native conformation in the lowest free-energy cluster
Jinzen Ikebe, Daron M Standley, Haruki Nakamura, et al.
Journal of Agricultural and Food Chemistry
|
February 17, 2025
Computational Design of <i>Burkholderia cepacia</i> Lipase Mutants that Show Enhanced Stereoselectivity in the Production of l-Menthol
Jinzen Ikebe, Kazunori Yoshida, Satoru Ishihara, et al.
Scientific Reports
|
May 16, 2022
Author Correction: Enzyme modification using mutation site prediction method for enhancing the regioselectivity of substrate reaction sites
Jinzen Ikebe, Munenori Suzuki, Aya Komori, et al.
Biomolecules
|
June 28, 2014
Conformational Ensembles of an Intrinsically Disordered Protein pKID with and without a KIX Domain in Explicit Solvent Investigated by All-Atom Multicanonical Molecular Dynamics
Koji Umezawa, Jinzen Ikebe, Mitsunori Takano, et al.
Biopolymers
|
January 31, 2009
Conformational requirement on peptides to exert laminin's activities and search for protein segments with laminin's activities
Koji Umezawa, Jinzen Ikebe, Motoyoshi Nomizu, et al.
Page
of 2