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BMC Bioinformatics
|
October 21, 2021
Fast activation maximization for molecular sequence design
Johannes Linder, Georg Seelig
Nature Methods
|
May 25, 2026
Teaching an old dog new cells
Johannes Linder, David R Kelley
Biorxiv : the Preprint Server for Biology
|
March 3, 2025
Selective State Space Models Outperform Transformers at Predicting RNA-Seq Read Coverage
Ian Holmes, Johannes Linder, David Kelley
Genome Biology
|
January 31, 2026
Parameter-efficient fine-tuning enables scalable transfer of regulatory sequence models to novel contexts
Han Yuan, Johannes Linder, David R Kelley
Genome Biology
|
November 6, 2022
Deciphering the impact of genetic variation on human polyadenylation using APARENT2
Johannes Linder, Samantha E Koplik, Anshul Kundaje, et al.
Cell
|
June 11, 2019
A Deep Neural Network for Predicting and Engineering Alternative Polyadenylation
Nicholas Bogard, Johannes Linder, Alexander B Rosenberg, et al.
Cell Systems
|
July 27, 2020
A Generative Neural Network for Maximizing Fitness and Diversity of Synthetic DNA and Protein Sequences
Johannes Linder, Nicholas Bogard, Alexander B Rosenberg, et al.
Nature Genetics
|
January 8, 2025
Predicting RNA-seq coverage from DNA sequence as a unifying model of gene regulation
Johannes Linder, Divyanshi Srivastava, Han Yuan, et al.
Nature Machine Intelligence
|
August 15, 2022
Interpreting Neural Networks for Biological Sequences by Learning Stochastic Masks
Johannes Linder, Alyssa La Fleur, Zibo Chen, et al.
Research Square
|
November 24, 2025
Predicting dynamic expression patterns in budding yeast with a fungal DNA language model
Kuan-Hao Chao, Majed Mohamed Magzoub, Emily Stoops, et al.
Page
of 2
Search research articles
Search
Showing results (1-10 of 19) with videos related to
Sort By:
Page
of 2
BMC Bioinformatics
|
October 21, 2021
Fast activation maximization for molecular sequence design
Johannes Linder, Georg Seelig
Nature Methods
|
May 25, 2026
Teaching an old dog new cells
Johannes Linder, David R Kelley
Biorxiv : the Preprint Server for Biology
|
March 3, 2025
Selective State Space Models Outperform Transformers at Predicting RNA-Seq Read Coverage
Ian Holmes, Johannes Linder, David Kelley
Genome Biology
|
January 31, 2026
Parameter-efficient fine-tuning enables scalable transfer of regulatory sequence models to novel contexts
Han Yuan, Johannes Linder, David R Kelley
Genome Biology
|
November 6, 2022
Deciphering the impact of genetic variation on human polyadenylation using APARENT2
Johannes Linder, Samantha E Koplik, Anshul Kundaje, et al.
Cell
|
June 11, 2019
A Deep Neural Network for Predicting and Engineering Alternative Polyadenylation
Nicholas Bogard, Johannes Linder, Alexander B Rosenberg, et al.
Cell Systems
|
July 27, 2020
A Generative Neural Network for Maximizing Fitness and Diversity of Synthetic DNA and Protein Sequences
Johannes Linder, Nicholas Bogard, Alexander B Rosenberg, et al.
Nature Genetics
|
January 8, 2025
Predicting RNA-seq coverage from DNA sequence as a unifying model of gene regulation
Johannes Linder, Divyanshi Srivastava, Han Yuan, et al.
Nature Machine Intelligence
|
August 15, 2022
Interpreting Neural Networks for Biological Sequences by Learning Stochastic Masks
Johannes Linder, Alyssa La Fleur, Zibo Chen, et al.
Research Square
|
November 24, 2025
Predicting dynamic expression patterns in budding yeast with a fungal DNA language model
Kuan-Hao Chao, Majed Mohamed Magzoub, Emily Stoops, et al.
Page
of 2