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Current Opinion in Structural Biology
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January 28, 2014
Assessing the accuracy of physical models used in protein-folding simulations: quantitative evidence from long molecular dynamics simulations
Stefano Piana, John L Klepeis, David E Shaw
Proteins
|
December 21, 2004
Ab initio prediction of the three-dimensional structure of a de novo designed protein: a double-blind case study
John L Klepeis, Yinan Wei, Michael H Hecht, et al.
Current Opinion in Structural Biology
|
April 14, 2009
Long-timescale molecular dynamics simulations of protein structure and function
John L Klepeis, Kresten Lindorff-Larsen, Ron O Dror, et al.
The Journal of Chemical Physics
|
March 3, 2005
Gaussian split Ewald: A fast Ewald mesh method for molecular simulation
Yibing Shan, John L Klepeis, Michael P Eastwood, et al.
Journal of the American Chemical Society
|
July 10, 2003
Integrated computational and experimental approach for lead optimization and design of compstatin variants with improved activity
John L Klepeis, Christodoulos A Floudas, Dimitrios Morikis, et al.
Proteins
|
April 22, 2010
Improved side-chain torsion potentials for the Amber ff99SB protein force field
Kresten Lindorff-Larsen, Stefano Piana, Kim Palmo, et al.
The Journal of Chemical Physics
|
February 9, 2007
A common, avoidable source of error in molecular dynamics integrators
Ross A Lippert, Kevin J Bowers, Ron O Dror, et al.
The Journal of Chemical Physics
|
November 4, 2017
Improving the accuracy of Møller-Plesset perturbation theory with neural networks
Robert T McGibbon, Andrew G Taube, Alexander G Donchev, et al.
Scientific Data
|
February 11, 2021
Quantum chemical benchmark databases of gold-standard dimer interaction energies
Alexander G Donchev, Andrew G Taube, Elizabeth Decolvenaere, et al.
The Journal of Physical Chemistry. B
|
March 4, 2008
Microsecond molecular dynamics simulation shows effect of slow loop dynamics on backbone amide order parameters of proteins
Paul Maragakis, Kresten Lindorff-Larsen, Michael P Eastwood, et al.
Page
of 2
Search research articles
Search
Showing results (1-10 of 11) with videos related to
Sort By:
Page
of 2
Current Opinion in Structural Biology
|
January 28, 2014
Assessing the accuracy of physical models used in protein-folding simulations: quantitative evidence from long molecular dynamics simulations
Stefano Piana, John L Klepeis, David E Shaw
Proteins
|
December 21, 2004
Ab initio prediction of the three-dimensional structure of a de novo designed protein: a double-blind case study
John L Klepeis, Yinan Wei, Michael H Hecht, et al.
Current Opinion in Structural Biology
|
April 14, 2009
Long-timescale molecular dynamics simulations of protein structure and function
John L Klepeis, Kresten Lindorff-Larsen, Ron O Dror, et al.
The Journal of Chemical Physics
|
March 3, 2005
Gaussian split Ewald: A fast Ewald mesh method for molecular simulation
Yibing Shan, John L Klepeis, Michael P Eastwood, et al.
Journal of the American Chemical Society
|
July 10, 2003
Integrated computational and experimental approach for lead optimization and design of compstatin variants with improved activity
John L Klepeis, Christodoulos A Floudas, Dimitrios Morikis, et al.
Proteins
|
April 22, 2010
Improved side-chain torsion potentials for the Amber ff99SB protein force field
Kresten Lindorff-Larsen, Stefano Piana, Kim Palmo, et al.
The Journal of Chemical Physics
|
February 9, 2007
A common, avoidable source of error in molecular dynamics integrators
Ross A Lippert, Kevin J Bowers, Ron O Dror, et al.
The Journal of Chemical Physics
|
November 4, 2017
Improving the accuracy of Møller-Plesset perturbation theory with neural networks
Robert T McGibbon, Andrew G Taube, Alexander G Donchev, et al.
Scientific Data
|
February 11, 2021
Quantum chemical benchmark databases of gold-standard dimer interaction energies
Alexander G Donchev, Andrew G Taube, Elizabeth Decolvenaere, et al.
The Journal of Physical Chemistry. B
|
March 4, 2008
Microsecond molecular dynamics simulation shows effect of slow loop dynamics on backbone amide order parameters of proteins
Paul Maragakis, Kresten Lindorff-Larsen, Michael P Eastwood, et al.
Page
of 2