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Nature Genetics|April 22, 2008
Interpreting principal component analyses of spatial population genetic variationJohn Novembre, Matthew StephensNature Genetics|December 8, 2015
Visualizing spatial population structure with estimated effective migration surfacesDesislava Petkova, John Novembre, Matthew StephensMolecular Biology and Evolution|January 24, 2018
Estimating Time to the Common Ancestor for a Beneficial AlleleJoel Smith, Graham Coop, Matthew Stephens, et al.Plos Genetics|January 15, 2019
Estimating recent migration and population-size surfacesHussein Al-Asadi, Desislava Petkova, Matthew Stephens, et al.Bioinformatics (Oxford, England)|September 8, 2018
Inference and visualization of DNA damage patterns using a grade of membership modelHussein Al-Asadi, Kushal K Dey, John Novembre, et al.Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences|April 18, 2022
The background and legacy of Lewontin's apportionment of human genetic diversityJohn NovembreEvolution; International Journal of Organic Evolution|July 24, 2009
Likelihood-based inference in isolation-by-distance models using the spatial distribution of low-frequency allelesJohn Novembre, Montgomery SlatkinPlos Computational Biology|April 17, 2018
Using pseudoalignment and base quality to accurately quantify microbial community compositionMark Reppell, John NovembreBiorxiv : the Preprint Server for Biology|June 12, 2025
Fine-Resolution Asymmetric Migration EstimationHao Shen, John NovembreBiorxiv : the Preprint Server for Biology|November 24, 2025
When migration leaves a clean trace: Decoupling migration from coalescence in the structured serial coalescentHao Shen, John NovembrePageof 27