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Nature Methods|September 22, 2014
Predicting the human epigenome from DNA motifsJohn W Whitaker, Zhao Chen, Wei WangNucleic Acids Research|September 17, 2013
Predicting enhancer transcription and activity from chromatin modificationsYun Zhu, Lin Sun, Zhao Chen, et al.Proceedings of the National Academy of Sciences of the United States of America|February 14, 2019
Epigenomic analysis reveals DNA motifs regulating histone modifications in human and mouseVu Ngo, Zhao Chen, Kai Zhang, et al.Nature Communications|March 11, 2016
Constructing 3D interaction maps from 1D epigenomesYun Zhu, Zhao Chen, Kai Zhang, et al.Methods (San Diego, Calif.)|December 3, 2014
Computational schemes for the prediction and annotation of enhancers from epigenomic assaysJohn W Whitaker, Tung T Nguyen, Yun Zhu, et al.Annals of the Rheumatic Diseases|June 28, 2012
DNA methylome signature in rheumatoid arthritisKazuhisa Nakano, John W Whitaker, David L Boyle, et al.Proceedings of the National Academy of Sciences of the United States of America|November 17, 2016
Epipolymorphisms associated with the clinical outcome of autoimmune arthritis affect CD4+ T cell activation pathwaysRoberto Spreafico, Maura Rossetti, John W Whitaker, et al.Nucleic Acids Research|July 24, 2019
Identification of DNA motifs that regulate DNA methylationMengchi Wang, Kai Zhang, Vu Ngo, et al.Genome Medicine|May 2, 2013
An imprinted rheumatoid arthritis methylome signature reflects pathogenic phenotypeJohn W Whitaker, Robert Shoemaker, David L Boyle, et al.Arthritis & Rheumatology (Hoboken, N.J.)|February 25, 2015
The Rheumatoid Arthritis Risk Gene LBH Regulates Growth in Fibroblast-like SynoviocytesAnna-Karin H Ekwall, John W Whitaker, Deepa Hammaker, et al.Pageof 3,860