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BMC Genomics|October 27, 2019
7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifsJonas Ibn-Salem, Miguel A Andrade-NavarroBMC Biology|August 9, 2018
Evolutionary stability of topologically associating domains is associated with conserved gene regulationJan Krefting, Miguel A Andrade-Navarro, Jonas Ibn-SalemEpigenetics & Chromatin|December 7, 2019
The distributions of protein coding genes within chromatin domains in relation to human diseaseEnrique M Muro, Jonas Ibn-Salem, Miguel A Andrade-NavarroNucleic Acids Research|September 17, 2016
Co-regulation of paralog genes in the three-dimensional chromatin architectureJonas Ibn-Salem, Enrique M Muro, Miguel A Andrade-NavarroGenes|July 21, 2019
Computational Processing and Quality Control of Hi-C, Capture Hi-C and Capture-C DataPeter Hansen, Michael Gargano, Jochen Hecht, et al.BMC Genomics|November 6, 2016
Q-nexus: a comprehensive and efficient analysis pipeline designed for ChIP-nexusPeter Hansen, Jochen Hecht, Jonas Ibn-Salem, et al.Genome Research|February 28, 2015
ChIP-exo signal associated with DNA-binding motifs provides insight into the genomic binding of the glucocorticoid receptor and cooperating transcription factorsStephan R Starick, Jonas Ibn-Salem, Marcel Jurk, et al.Nature Biotechnology|April 5, 2022
Accurate detection of tumor-specific gene fusions reveals strongly immunogenic personal neo-antigensDavid Weber, Jonas Ibn-Salem, Patrick Sorn, et al.Genome Medicine|June 23, 2026
Tumor-naïve ctDNA detection with deep learning-enhanced error suppression for sensitive mutation callingShaya Akbarinejad, Sarah Doppler, Jos de Graaf, et al.Journal of Medical Genetics|October 5, 2014
Clinical interpretation of CNVs with cross-species phenotype dataSebastian Köhler, Uwe Schoeneberg, Johanna Christina Czeschik, et al.Pageof 2