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February 26, 2022
Searching for a mechanistic description of pairwise epistasis in protein systems
Jonathan E Barnes, Craig R Miller, Frederick Marty Ytreberg
Biorxiv : the Preprint Server for Biology
|
October 10, 2024
Leveraging neural networks to correct FoldX free energy estimates
Jonathan E Barnes, L América Chi, F Marty Ytreberg, et al.
Scientific Reports
|
October 4, 2024
Exploring the ability of the MD+FoldX method to predict SARS-CoV-2 antibody escape mutations using large-scale data
L América Chi, Jonathan E Barnes, Jagdish Suresh Patel, et al.
Biorxiv : the Preprint Server for Biology
|
June 3, 2024
Exploring the ability of the MD+FoldX method to predict SARS-CoV-2 antibody escape mutations using large-scale data
L América Chi, Jonathan E Barnes, Jagdish Suresh Patel, et al.
Scientific Reports
|
November 6, 2022
The effect of mutations on binding interactions between the SARS-CoV-2 receptor binding domain and neutralizing antibodies B38 and CB6
Jonathan E Barnes, Peik K Lund-Andersen, Jagdish Suresh Patel, et al.
ACS Omega
|
June 1, 2026
Leveraging Neural Networks to Correct FoldX Free Energy Estimates
Jonathan E Barnes, L América Chi, Shubham Kumar Pandey, et al.
Plos One
|
December 21, 2020
Assessment of software methods for estimating protein-protein relative binding affinities
Tawny R Gonzalez, Kyle P Martin, Jonathan E Barnes, et al.
Plos Computational Biology
|
October 21, 2020
Short-wavelength-sensitive 2 (Sws2) visual photopigment models combined with atomistic molecular simulations to predict spectral peaks of absorbance
Dharmeshkumar Patel, Jonathan E Barnes, Wayne I L Davies, et al.
Biorxiv : the Preprint Server for Biology
|
October 10, 2024
Molecular Mechanisms Underlying the Spectral Shift in Zebrafish Cone Opsins
L América Chi, Shubham Kumar Pandey, Wojciech Kolodziejczyk, et al.
Science Advances
|
February 11, 2026
Deep-sea fish reveal an alternative developmental trajectory for vertebrate vision
Lily G Fogg, Stamatina Isari, Jonathan E Barnes, et al.
Page
of 2
Search research articles
Search
Showing results (1-10 of 13) with videos related to
Sort By:
Page
of 2
Proteins
|
February 26, 2022
Searching for a mechanistic description of pairwise epistasis in protein systems
Jonathan E Barnes, Craig R Miller, Frederick Marty Ytreberg
Biorxiv : the Preprint Server for Biology
|
October 10, 2024
Leveraging neural networks to correct FoldX free energy estimates
Jonathan E Barnes, L América Chi, F Marty Ytreberg, et al.
Scientific Reports
|
October 4, 2024
Exploring the ability of the MD+FoldX method to predict SARS-CoV-2 antibody escape mutations using large-scale data
L América Chi, Jonathan E Barnes, Jagdish Suresh Patel, et al.
Biorxiv : the Preprint Server for Biology
|
June 3, 2024
Exploring the ability of the MD+FoldX method to predict SARS-CoV-2 antibody escape mutations using large-scale data
L América Chi, Jonathan E Barnes, Jagdish Suresh Patel, et al.
Scientific Reports
|
November 6, 2022
The effect of mutations on binding interactions between the SARS-CoV-2 receptor binding domain and neutralizing antibodies B38 and CB6
Jonathan E Barnes, Peik K Lund-Andersen, Jagdish Suresh Patel, et al.
ACS Omega
|
June 1, 2026
Leveraging Neural Networks to Correct FoldX Free Energy Estimates
Jonathan E Barnes, L América Chi, Shubham Kumar Pandey, et al.
Plos One
|
December 21, 2020
Assessment of software methods for estimating protein-protein relative binding affinities
Tawny R Gonzalez, Kyle P Martin, Jonathan E Barnes, et al.
Plos Computational Biology
|
October 21, 2020
Short-wavelength-sensitive 2 (Sws2) visual photopigment models combined with atomistic molecular simulations to predict spectral peaks of absorbance
Dharmeshkumar Patel, Jonathan E Barnes, Wayne I L Davies, et al.
Biorxiv : the Preprint Server for Biology
|
October 10, 2024
Molecular Mechanisms Underlying the Spectral Shift in Zebrafish Cone Opsins
L América Chi, Shubham Kumar Pandey, Wojciech Kolodziejczyk, et al.
Science Advances
|
February 11, 2026
Deep-sea fish reveal an alternative developmental trajectory for vertebrate vision
Lily G Fogg, Stamatina Isari, Jonathan E Barnes, et al.
Page
of 2