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Bioinformatics (Oxford, England)
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April 23, 2024
For antibody sequence generative modeling, mixture models may be all you need
Jonathan Parkinson, Wei Wang
Journal of Chemical Information and Modeling
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July 27, 2023
Linear-Scaling Kernels for Protein Sequences and Small Molecules Outperform Deep Learning While Providing Uncertainty Quantitation and Improved Interpretability
Jonathan Parkinson, Wei Wang
Nature Communications
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January 28, 2023
The RESP AI model accelerates the identification of tight-binding antibodies
Jonathan Parkinson, Ryan Hard, Wei Wang
Briefings in Bioinformatics
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January 29, 2026
Scalable embedding fusion with protein language models: insights from benchmarking text-integrated representations
Young Su Ko, Jonathan Parkinson, Wei Wang
Biorxiv : the Preprint Server for Biology
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December 15, 2025
Scalable embedding fusion with protein language models: insights from benchmarking text-integrated representations
Young Su Ko, Jonathan Parkinson, Wei Wang
Proteins
|
August 4, 2022
Engineering human JMJD2A tudor domains for an improved understanding of histone peptide recognition
Jonathan Parkinson, Ryan Hard, Richard Ainsworth, et al.
Advanced Science (Weinheim, Baden-Wurttemberg, Germany)
|
September 5, 2025
RESP2: An Uncertainty Aware Multi-Target Multi-Property Optimization AI Pipeline for Antibody Discovery
Jonathan Parkinson, Ryan Hard, Young Su Ko, et al.
Biorxiv : the Preprint Server for Biology
|
August 12, 2024
RESP2: An uncertainty aware multi-target multi-property optimization AI pipeline for antibody discovery
Jonathan Parkinson, Ryan Hard, Young Su Ko, et al.
Briefings in Bioinformatics
|
July 25, 2024
TUnA: an uncertainty-aware transformer model for sequence-based protein-protein interaction prediction
Young Su Ko, Jonathan Parkinson, Cong Liu, et al.
Journal of Chemical Information and Modeling
|
August 14, 2020
Engineering a Histone Reader Protein by Combining Directed Evolution, Sequencing, and Neural Network Based Ordinal Regression
Jonathan Parkinson, Ryan Hard, Richard I Ainsworth, et al.
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Search research articles
Search
Showing results (1-10 of 20) with videos related to
Sort By:
Page
of 2
Bioinformatics (Oxford, England)
|
April 23, 2024
For antibody sequence generative modeling, mixture models may be all you need
Jonathan Parkinson, Wei Wang
Journal of Chemical Information and Modeling
|
July 27, 2023
Linear-Scaling Kernels for Protein Sequences and Small Molecules Outperform Deep Learning While Providing Uncertainty Quantitation and Improved Interpretability
Jonathan Parkinson, Wei Wang
Nature Communications
|
January 28, 2023
The RESP AI model accelerates the identification of tight-binding antibodies
Jonathan Parkinson, Ryan Hard, Wei Wang
Briefings in Bioinformatics
|
January 29, 2026
Scalable embedding fusion with protein language models: insights from benchmarking text-integrated representations
Young Su Ko, Jonathan Parkinson, Wei Wang
Biorxiv : the Preprint Server for Biology
|
December 15, 2025
Scalable embedding fusion with protein language models: insights from benchmarking text-integrated representations
Young Su Ko, Jonathan Parkinson, Wei Wang
Proteins
|
August 4, 2022
Engineering human JMJD2A tudor domains for an improved understanding of histone peptide recognition
Jonathan Parkinson, Ryan Hard, Richard Ainsworth, et al.
Advanced Science (Weinheim, Baden-Wurttemberg, Germany)
|
September 5, 2025
RESP2: An Uncertainty Aware Multi-Target Multi-Property Optimization AI Pipeline for Antibody Discovery
Jonathan Parkinson, Ryan Hard, Young Su Ko, et al.
Biorxiv : the Preprint Server for Biology
|
August 12, 2024
RESP2: An uncertainty aware multi-target multi-property optimization AI pipeline for antibody discovery
Jonathan Parkinson, Ryan Hard, Young Su Ko, et al.
Briefings in Bioinformatics
|
July 25, 2024
TUnA: an uncertainty-aware transformer model for sequence-based protein-protein interaction prediction
Young Su Ko, Jonathan Parkinson, Cong Liu, et al.
Journal of Chemical Information and Modeling
|
August 14, 2020
Engineering a Histone Reader Protein by Combining Directed Evolution, Sequencing, and Neural Network Based Ordinal Regression
Jonathan Parkinson, Ryan Hard, Richard I Ainsworth, et al.
Page
of 2