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Genome Biology|October 20, 2023
DIVE: a reference-free statistical approach to diversity-generating and mobile genetic element discoveryJordi Abante, Peter L Wang, Julia Salzman
BMC Bioinformatics|March 9, 2018
An information-theoretic approach to the modeling and analysis of whole-genome bisulfite sequencing dataGarrett Jenkinson, Jordi Abante, Andrew P Feinberg, et al.
Scientific Reports|November 4, 2021
Estimating DNA methylation potential energy landscapes from nanopore sequencing dataJordi Abante, Sandeep Kambhampati, Andrew P Feinberg, et al.
BMC Genomics|September 7, 2017
HiMMe: using genetic patterns as a proxy for genome assembly reliability assessmentJordi Abante, Noushin Ghaffari, Charles D Johnson, et al.
BMC Bioinformatics|April 10, 2019
Ranking genomic features using an information-theoretic measure of epigenetic discordanceGarrett Jenkinson, Jordi Abante, Michael A Koldobskiy, et al.
Nucleic Acids Research|February 10, 2023
DNA methylation entropy is associated with DNA sequence features and developmental epigenetic divergenceYuqi Fang, Zhicheng Ji, Weiqiang Zhou, et al.
Neurobiology of Disease|April 12, 2025
CD200-based cell sorting results in homogeneous transplantable striatal neuroblasts for human cell therapy for Huntington's diseaseFrancisco J Molina-Ruiz, Phil Sanders, Cinta Gomis, et al.
Epigenetics|March 3, 2020
A Dysregulated DNA Methylation Landscape Linked to Gene Expression in MLL-Rearranged AMLMichael A Koldobskiy, Jordi Abante, Garrett Jenkinson, et al.
Nature Biomedical Engineering|April 16, 2021
Converging genetic and epigenetic drivers of paediatric acute lymphoblastic leukaemia identified by an information-theoretic analysisMichael A Koldobskiy, Garrett Jenkinson, Jordi Abante, et al.
Genome Biology|June 4, 2020
Universal promoter scanning by Pol II during transcription initiation in Saccharomyces cerevisiaeChenxi Qiu, Huiyan Jin, Irina Vvedenskaya, et al.
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