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Jose Lugo-Martinez

Showing results (1-10 of 25) with videos related to

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Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|May 28, 2025
Combined Topological Data Analysis and Geometric Deep Learning Reveal Niches by the Quantification of Protein Binding PocketsPeiran Jiang, Jose Lugo-Martinez
STAR Protocols|February 13, 2025
Protocol to recover single-cell gene expression profiles from spatial transcriptomics data using cluster computingYoung Je Lee, Hao Chen, Jose Lugo-Martinez
Biorxiv : the Preprint Server for Biology|November 1, 2024
Improved protein interaction models predict differences in complexes between human cell linesGary R Wilkins, Jose Lugo-Martinez, Robert F Murphy
Briefings in Bioinformatics|February 8, 2023
A hybrid positive unlabeled learning framework for uncovering scaffolds across human proteome by measuring the propensity to drive phase separationPeiran Jiang, Ruoxi Cai, Jose Lugo-Martinez, et al.
Microbiome|April 4, 2019
Dynamic interaction network inference from longitudinal microbiome dataJose Lugo-Martinez, Daniel Ruiz-Perez, Giri Narasimhan, et al.
ACM-BCB ... ... : the ... ACM Conference on Bioinformatics, Computational Biology and Biomedicine. ACM Conference on Bioinformatics, Computational Biology and Biomedicine|May 28, 2020
Integration of Heterogeneous Experimental Data Improves Global Map of Human Protein ComplexesJose Lugo-Martinez, Ziv Bar-Joseph, Jörn Dengjel, et al.
Molecular Biology and Evolution|May 28, 2013
Estimating gene gain and loss rates in the presence of error in genome assembly and annotation using CAFE 3Mira V Han, Gregg W C Thomas, Jose Lugo-Martinez, et al.
Bioinformatics (Oxford, England)|September 5, 2020
Classification in biological networks with hypergraphlet kernelsJose Lugo-Martinez, Daniel Zeiberg, Thomas Gaudelet, et al.
Msystems|March 31, 2021
Dynamic Bayesian Networks for Integrating Multi-omics Time Series Microbiome DataDaniel Ruiz-Perez, Jose Lugo-Martinez, Natalia Bourguignon, et al.
Biorxiv : the Preprint Server for Biology|April 27, 2026
SpaTRACE: Spatiotemporal recurrent auto-encoder for reconstructing signaling and regulatory networks from spatiotemporal transcriptomics dataHongliang Zhou, Hao Chen, Zoe Rudnick, et al.
Pageof 3

Showing results (1-10 of 25) with videos related to

Sort By:
Pageof 3
Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|May 28, 2025
Combined Topological Data Analysis and Geometric Deep Learning Reveal Niches by the Quantification of Protein Binding PocketsPeiran Jiang, Jose Lugo-Martinez
STAR Protocols|February 13, 2025
Protocol to recover single-cell gene expression profiles from spatial transcriptomics data using cluster computingYoung Je Lee, Hao Chen, Jose Lugo-Martinez
Biorxiv : the Preprint Server for Biology|November 1, 2024
Improved protein interaction models predict differences in complexes between human cell linesGary R Wilkins, Jose Lugo-Martinez, Robert F Murphy
Briefings in Bioinformatics|February 8, 2023
A hybrid positive unlabeled learning framework for uncovering scaffolds across human proteome by measuring the propensity to drive phase separationPeiran Jiang, Ruoxi Cai, Jose Lugo-Martinez, et al.
Microbiome|April 4, 2019
Dynamic interaction network inference from longitudinal microbiome dataJose Lugo-Martinez, Daniel Ruiz-Perez, Giri Narasimhan, et al.
ACM-BCB ... ... : the ... ACM Conference on Bioinformatics, Computational Biology and Biomedicine. ACM Conference on Bioinformatics, Computational Biology and Biomedicine|May 28, 2020
Integration of Heterogeneous Experimental Data Improves Global Map of Human Protein ComplexesJose Lugo-Martinez, Ziv Bar-Joseph, Jörn Dengjel, et al.
Molecular Biology and Evolution|May 28, 2013
Estimating gene gain and loss rates in the presence of error in genome assembly and annotation using CAFE 3Mira V Han, Gregg W C Thomas, Jose Lugo-Martinez, et al.
Bioinformatics (Oxford, England)|September 5, 2020
Classification in biological networks with hypergraphlet kernelsJose Lugo-Martinez, Daniel Zeiberg, Thomas Gaudelet, et al.
Msystems|March 31, 2021
Dynamic Bayesian Networks for Integrating Multi-omics Time Series Microbiome DataDaniel Ruiz-Perez, Jose Lugo-Martinez, Natalia Bourguignon, et al.
Biorxiv : the Preprint Server for Biology|April 27, 2026
SpaTRACE: Spatiotemporal recurrent auto-encoder for reconstructing signaling and regulatory networks from spatiotemporal transcriptomics dataHongliang Zhou, Hao Chen, Zoe Rudnick, et al.
Pageof 3