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Proceedings of Machine Learning Research|August 12, 2024
Py-Tetrad and RPy-Tetrad: A New Python Interface with R Support for Tetrad Causal SearchJoseph D Ramsey, Bryan AndrewsBriefings in Bioinformatics|April 19, 2026
Causal modeling reveals cell-cell communication dynamics in the tumor microenvironment during anti-PD-1 therapy in breast cancer patientsAodong Qiu, Han Zhang, Joseph D Ramsey, et al.Microbial Genomics|April 3, 2020
Distinct patterns of mutational sensitivity for <i>λ</i> resistance and maltodextrin transport in <i>Escherichia coli</i> LamBBryan Andrews, Stanley FieldsBiorxiv : the Preprint Server for Biology|April 10, 2026
BCAR: A fast and general barcode-sequence mapper for correcting sequencing errorsBryan Andrews, Rama RanganathanThe ISME Journal|February 16, 2021
Balance between promiscuity and specificity in phage λ host rangeBryan Andrews, Stanley FieldsThe Behavioral and Brain Sciences|February 4, 2024
Beyond integrative experiment design: Systematic experimentation guided by causal discovery AIErich Kummerfeld, Bryan AndrewsNeuroimage|October 9, 2013
Non-Gaussian methods and high-pass filters in the estimation of effective connectionsJoseph D Ramsey, Ruben Sanchez-Romero, Clark GlymourNeuroimage|July 13, 2011
Multi-subject search correctly identifies causal connections and most causal directions in the DCM models of the Smith et al. simulation studyJoseph D Ramsey, Stephen José Hanson, Clark GlymourProceedings of Machine Learning Research|August 28, 2019
Learning High-dimensional Directed Acyclic Graphs with Mixed Data-typesBryan Andrews, Joseph Ramsey, Gregory F CooperPageof 3