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Briefings in Bioinformatics
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February 8, 2022
Deciphering the etiology and role in oncogenic transformation of the CpG island methylator phenotype: a pan-cancer analysis
Josephine Yates, Valentina Boeva
Cancer Cell
|
April 15, 2025
New horizons at the interface of artificial intelligence and translational cancer research
Josephine Yates, Eliezer M Van Allen
Genome Biology
|
April 9, 2025
Filtering cells with high mitochondrial content depletes viable metabolically altered malignant cell populations in cancer single-cell studies
Josephine Yates, Agnieszka Kraft, Valentina Boeva
Genome Research
|
February 18, 2026
Robust and efficient annotation of cell states through gene signature scoring
Laure Ciernik, Agnieszka Kraft, Florian Barkmann, et al.
Journal of the National Cancer Institute
|
January 26, 2024
DNA-methylation variability in normal mucosa: a field cancerization marker in patients with adenomatous polyps
Josephine Yates, Helen Schaufelberger, Roland Steinacher, et al.
Biorxiv : the Preprint Server for Biology
|
March 27, 2026
SpatialFusion: A lightweight multimodal foundation model for pathway-informed spatial niche mapping
Josephine Yates, Mitra Shavakhi, Toni K Choueiri, et al.
Cancer Research
|
November 13, 2025
CanSig Benchmarks Methods for Reproducible Cancer Cell State Discovery from Single-Cell Transcriptomic Data
Florian Barkmann, Josephine Yates, Paweł Czyż, et al.
NAR Genomics and Bioinformatics
|
June 19, 2023
scROSHI: robust supervised hierarchical identification of single cells
Michael Prummer, Anne Bertolini, Lars Bosshard, et al.
Journal of the American Medical Informatics Association : JAMIA
|
May 19, 2021
Finding commonalities in rare diseases through the undiagnosed diseases network
Josephine Yates, Alba Gutiérrez-Sacristán, Vianney Jouhet, et al.
Nucleic Acids Research
|
May 21, 2026
UniversalEPI: robust prediction of cell type-specific and differential chromatin interactions from DNA sequence and chromatin accessibility
Aayush Grover, Lin Zhang, Till Muser, et al.
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of 2
Search research articles
Search
Showing results (1-10 of 15) with videos related to
Sort By:
Page
of 2
Briefings in Bioinformatics
|
February 8, 2022
Deciphering the etiology and role in oncogenic transformation of the CpG island methylator phenotype: a pan-cancer analysis
Josephine Yates, Valentina Boeva
Cancer Cell
|
April 15, 2025
New horizons at the interface of artificial intelligence and translational cancer research
Josephine Yates, Eliezer M Van Allen
Genome Biology
|
April 9, 2025
Filtering cells with high mitochondrial content depletes viable metabolically altered malignant cell populations in cancer single-cell studies
Josephine Yates, Agnieszka Kraft, Valentina Boeva
Genome Research
|
February 18, 2026
Robust and efficient annotation of cell states through gene signature scoring
Laure Ciernik, Agnieszka Kraft, Florian Barkmann, et al.
Journal of the National Cancer Institute
|
January 26, 2024
DNA-methylation variability in normal mucosa: a field cancerization marker in patients with adenomatous polyps
Josephine Yates, Helen Schaufelberger, Roland Steinacher, et al.
Biorxiv : the Preprint Server for Biology
|
March 27, 2026
SpatialFusion: A lightweight multimodal foundation model for pathway-informed spatial niche mapping
Josephine Yates, Mitra Shavakhi, Toni K Choueiri, et al.
Cancer Research
|
November 13, 2025
CanSig Benchmarks Methods for Reproducible Cancer Cell State Discovery from Single-Cell Transcriptomic Data
Florian Barkmann, Josephine Yates, Paweł Czyż, et al.
NAR Genomics and Bioinformatics
|
June 19, 2023
scROSHI: robust supervised hierarchical identification of single cells
Michael Prummer, Anne Bertolini, Lars Bosshard, et al.
Journal of the American Medical Informatics Association : JAMIA
|
May 19, 2021
Finding commonalities in rare diseases through the undiagnosed diseases network
Josephine Yates, Alba Gutiérrez-Sacristán, Vianney Jouhet, et al.
Nucleic Acids Research
|
May 21, 2026
UniversalEPI: robust prediction of cell type-specific and differential chromatin interactions from DNA sequence and chromatin accessibility
Aayush Grover, Lin Zhang, Till Muser, et al.
Page
of 2