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Cell|September 20, 2024
Genetic tracing of market wildlife and viruses at the epicenter of the COVID-19 pandemicAlexander Crits-Christoph, Joshua I Levy, Jonathan E Pekar, et al.Nature Methods|February 24, 2023
Outbreak.info genomic reports: scalable and dynamic surveillance of SARS-CoV-2 variants and mutationsKarthik Gangavarapu, Alaa Abdel Latif, Julia L Mullen, et al.Nature Communications|November 30, 2023
Utilizing river and wastewater as a SARS-CoV-2 surveillance tool in settings with limited formal sewage systemsKayla G Barnes, Joshua I Levy, Jillian Gauld, et al.PLOS Global Public Health|May 5, 2025
Wastewater-integrated pathogen surveillance dashboards enable real-time, transparent, and interpretable public health risk assessment and disseminationNosihle S Msomi, Joshua I Levy, Nathaniel L Matteson, et al.Science (New York, N.Y.)|July 26, 2022
The molecular epidemiology of multiple zoonotic origins of SARS-CoV-2Jonathan E Pekar, Andrew Magee, Edyth Parker, et al.The Lancet. Microbe|May 28, 2026
Project ODIN: advancing environmental genomic surveillance for public health across sub-Saharan AfricaBonny Baker, José Antonio Baz Lomba, Joseph Bitilinyu-Bangoh, et al.Microbial Genomics|May 24, 2024
Tracking SARS-CoV-2 variants of concern in wastewater: an assessment of nine computational tools using simulated genomic dataSteven G Sutcliffe, Susanne A Kraemer, Isaac Ellmen, et al.Nature Medicine|May 12, 2026
Genomic epidemiology of the 2025 mpox epidemic in Sierra LeoneAllan K O Campbell, John Demby Sandi, Ifeanyi F Omah, et al.Medrxiv : the Preprint Server for Health Sciences|April 12, 2022
Wastewater sequencing uncovers early, cryptic SARS-CoV-2 variant transmissionSmruthi Karthikeyan, Joshua I Levy, Peter De Hoff, et al.Nature|July 7, 2022
Wastewater sequencing reveals early cryptic SARS-CoV-2 variant transmissionSmruthi Karthikeyan, Joshua I Levy, Peter De Hoff, et al.Pageof 3