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Environmental Microbiology|October 24, 2013
Software platforms to facilitate reconstructing genome-scale metabolic networksJoshua J Hamilton, Jennifer L ReedPlos One|June 6, 2012
Identification of functional differences in metabolic networks using comparative genomics and constraint-based modelsJoshua J Hamilton, Jennifer L ReedBiophysical Journal|July 23, 2013
Quantitative assessment of thermodynamic constraints on the solution space of genome-scale metabolic modelsJoshua J Hamilton, Vivek Dwivedi, Jennifer L ReedPlos Computational Biology|July 7, 2015
Thermodynamics and H2 Transfer in a Methanogenic, Syntrophic CommunityJoshua J Hamilton, Montserrat Calixto Contreras, Jennifer L ReedPlos One|November 4, 2014
Genome-scale reconstruction of metabolic networks of Lactobacillus casei ATCC 334 and 12AElena Vinay-Lara, Joshua J Hamilton, Buffy Stahl, et al.Plos Computational Biology|September 8, 2012
Shrinking the metabolic solution space using experimental datasetsJennifer L ReedAnnual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference|December 8, 2009
Descriptive and predictive applications of constraint-based metabolic modelsJennifer L ReedBMC Bioinformatics|January 31, 2013
Mechanistic analysis of multi-omics datasets to generate kinetic parameters for constraint-based metabolic modelsCameron Cotten, Jennifer L ReedBiotechnology Journal|May 25, 2013
Constraint-based strain design using continuous modifications (CosMos) of flux bounds finds new strategies for metabolic engineeringCameron Cotten, Jennifer L ReedPlos One|October 10, 2014
Adaptive evolution of synthetic cooperating communities improves growth performanceXiaolin Zhang, Jennifer L ReedPageof 24